RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 PPP1R14BQ96C90 147 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 SLC25A36Q96CQ1 311 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 RADILQ96JH8 1075 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 EPYCQ99645 322 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 VRK1Q99986 396 aaPredicted RBP5.05□□□□□ -1.6
VARS-222ENST00000470953 KCNS3Q9BQ31 491 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 USB1Q9BQ65 265 aaKnown RBP5.05□□□□□ -1.6
VARS-222ENST00000470953 ECSITQ9BQ95 431 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 C1QTNF6Q9BXI9 259 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 ASPNQ9BXN1 380 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 TMEM38AQ9H6F2 299 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 NARFLQ9H6Q4 476 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 BCO1Q9HAY6 547 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 TMEM27Q9HBJ8 222 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 BCL2L10Q9HD36 194 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 PARPBPQ9NWS1 579 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 GID8Q9NWU2 228 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 ASB6Q9NWX5 421 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 TAS2R16Q9NYV7 291 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 SLAMF8Q9P0V8 285 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 PRSS50Q9UI38 385 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 MOKQ9UQ07 419 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 TRAPPC4Q9Y296 219 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 MMP24Q9Y5R2 645 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 ATP23Q9Y6H3 246 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 IGKV3D-15A0A087WSY6 115 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 A0A1B0GWA3 101 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 ZC3H12DA2A288 527 aaKnown RBP5.04□□□□□ -1.6
VARS-222ENST00000470953 LIPT2A6NK58 231 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 AQP7P3A6NL99 342 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 ZNF587BE7ETH6 402 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 M0R3H8 397 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 AIM2O14862 343 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 SERPINI2O75830 405 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 AKR7A3O95154 331 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 OR6A2O95222 327 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 IFNA14P01570 189 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 MSMBP08118 114 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 UMPSP11172 480 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 BMP2P12643 396 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 PRG2P13727 222 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 ZNF43P17038 809 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 GPX2P18283 190 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 CD247P20963 164 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 APOBEC3AP31941 199 aaPredicted RBP5.04□□□□□ -1.6
VARS-222ENST00000470953 IFNA8P32881 189 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 RPS5P46782 204 aaKnown RBP5.04□□□□□ -1.6
VARS-222ENST00000470953 PDK3Q15120 406 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 TUSC1Q2TAM9 212 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 LRRC23Q53EV4 343 aaPredicted RBP5.04□□□□□ -1.6
VARS-222ENST00000470953 CCDC92Q53HC0 331 aaPredicted RBP5.04□□□□□ -1.6
VARS-222ENST00000470953 DEFB121Q5J5C9 76 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 C9orf135Q5VTT2 229 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 FBXW9Q5XUX1 488 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 REP15Q6BDI9 236 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 DHRS4L2Q6PKH6 230 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 C5orf46Q6UWT4 87 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 TMEM108Q6UXF1 575 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 SSX8Q7RTT4 187 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 C1QL2Q7Z5L3 287 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 ARPINQ7Z6K5 226 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 PATL1Q86TB9 770 aaKnown RBP5.04□□□□□ -1.6
VARS-222ENST00000470953 CCDC103Q8IW40 242 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 MSRB3Q8IXL7 192 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 ZCCHC24Q8N2G6 241 aaKnown RBP5.04□□□□□ -1.6
VARS-222ENST00000470953 BPIFB2Q8N4F0 458 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 DPP10Q8N608 796 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 OR9K2Q8NGE7 335 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 OR52N5Q8NH56 324 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 OR10A6Q8NH74 314 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 CLDND2Q8NHS1 167 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 TSPEARQ8WU66 669 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 RASSF5Q8WWW0 418 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 SLC35B4Q969S0 331 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 PPP1R14AQ96A00 147 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 TMIGD2Q96BF3 282 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 ZNF524Q96C55 264 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 SLC47A1Q96FL8 570 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 DHRS1Q96LJ7 313 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 ANKRD27Q96NW4 1050 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 ALKBH3Q96Q83 286 aaPredicted RBP5.04□□□□□ -1.6
VARS-222ENST00000470953 TMPRSS13Q9BYE2 586 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 IKZF5Q9H5V7 419 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 PIF1Q9H611 641 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 EVA1AQ9H8M9 152 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 G6PC2Q9NQR9 355 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 KLHL14Q9P2G3 628 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 RABL2BQ9UNT1 228 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 GRIP1Q9Y3R0 1128 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 U3KQK5 164 aa5.04□□□□□ -1.6
VARS-222ENST00000470953 TRAV36DV7A0A075B6V5 113 aa5.03□□□□□ -1.6
VARS-222ENST00000470953 TRBV5-3A0A0A0MS03 114 aa5.03□□□□□ -1.6
VARS-222ENST00000470953 OR6C65A6NJZ3 312 aa5.03□□□□□ -1.6
VARS-222ENST00000470953 CPSF4LA6NMK7 179 aaKnown RBP5.03□□□□□ -1.6
VARS-222ENST00000470953 ZNF716A6NP11 495 aa5.03□□□□□ -1.6
VARS-222ENST00000470953 FAM25EA8MYX2 175 aa5.03□□□□□ -1.6
VARS-222ENST00000470953 ATP6V1G2-DDX39BF2Z307 99 aa5.03□□□□□ -1.6
VARS-222ENST00000470953 M0R1B8 84 aa5.03□□□□□ -1.6
VARS-222ENST00000470953 KPNA4O00629 521 aaPredicted RBP5.03□□□□□ -1.6
VARS-222ENST00000470953 GSTA4O15217 222 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms