RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 PLA2G12AQ9BZM1 189 aa11.14□□□□□ -0.63
SND1-209ENST00000470723 SMURF2Q9HAU4 748 aa11.14□□□□□ -0.63
SND1-209ENST00000470723 PRSS50Q9UI38 385 aa11.14□□□□□ -0.63
SND1-209ENST00000470723 BAIAP2Q9UQB8 552 aa11.14□□□□□ -0.63
SND1-209ENST00000470723 POFUT2Q9Y2G5 429 aa11.14□□□□□ -0.63
SND1-209ENST00000470723 GPR52Q9Y2T5 361 aa11.14□□□□□ -0.63
SND1-209ENST00000470723 IER3IP1Q9Y5U9 82 aa11.14□□□□□ -0.63
SND1-209ENST00000470723 CASQ2O14958 399 aaPredicted RBP11.13□□□□□ -0.63
SND1-209ENST00000470723 UPK3AO75631 287 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 SMNDC1O75940 238 aaKnown RBP eCLIP11.13□□□□□ -0.63
SND1-209ENST00000470723 BAG2O95816 211 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 IGHG1P01857 330 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 IGFBP1P08833 259 aaPredicted RBP11.13□□□□□ -0.63
SND1-209ENST00000470723 IGFBP2P18065 325 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 MPGP29372 298 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 CD79BP40259 229 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 RPS6KA3P51812 740 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 IL1RL1Q01638 556 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 FAM27E3Q08E93 113 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 ITGADQ13349 1161 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 CAMK2DQ13557 499 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 RCN1Q15293 331 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 PHYHD1Q5SRE7 291 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 THEM4Q5T1C6 240 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 SFRP5Q5T4F7 317 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 CASP12Q6UXS9 341 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 STAC2Q6ZMT1 411 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 LINGO2Q7L985 606 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 IGFN1Q86VF2 1251 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 ZNF433Q8N7K0 673 aaPredicted RBP11.13□□□□□ -0.63
SND1-209ENST00000470723 ICA1LQ8NDH6 482 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 OR8D4Q8NGM9 314 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 FANK1Q8TC84 345 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 HDAC2Q92769 488 aaKnown RBP11.13□□□□□ -0.63
SND1-209ENST00000470723 LRRC46Q96FV0 321 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 Q96M85 177 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 SLC29A1Q99808 456 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 C9orf16Q9BUW7 83 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 RBM24Q9BX46 236 aaKnown RBP11.13□□□□□ -0.63
SND1-209ENST00000470723 EGLN3Q9H6Z9 239 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 C8orf4Q9NR00 106 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 PAPOLBQ9NRJ5 636 aaKnown RBP11.13□□□□□ -0.63
SND1-209ENST00000470723 ASB6Q9NWX5 421 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 GLTPQ9NZD2 209 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 VSX1Q9NZR4 365 aaPredicted RBP11.13□□□□□ -0.63
SND1-209ENST00000470723 GRHPRQ9UBQ7 328 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 ADAM18Q9Y3Q7 739 aa11.13□□□□□ -0.63
SND1-209ENST00000470723 DOPEY2Q9Y3R5 2298 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 PRR14LQ5THK1 2151 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 NKX2-6A6NCS4 301 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 SAC3D1A6NKF1 404 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 C16orf97H3BN30 126 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 HOXB1P14653 301 aaPredicted RBP11.12□□□□□ -0.63
SND1-209ENST00000470723 IGHV1-2P23083 117 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 ACVR1BP36896 505 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 PEX19P40855 299 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 CDKN2AP42771 156 aaKnown RBP11.12□□□□□ -0.63
SND1-209ENST00000470723 ALDH3A2P51648 485 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 CRISP1P54107 249 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 EFNB1P98172 346 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 SORDQ00796 357 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 DAG1Q14118 895 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 SLC36A3Q495N2 470 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 C10orf128Q5T292 105 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 ZBTB49Q6ZSB9 765 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 ABHD12BQ7Z5M8 362 aaPredicted RBP11.12□□□□□ -0.63
SND1-209ENST00000470723 LUZP2Q86TE4 346 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 OR2T33Q8NG76 320 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 MCHR2Q969V1 340 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 ERMAPQ96PL5 475 aaPredicted RBP11.12□□□□□ -0.63
SND1-209ENST00000470723 RBP7Q96R05 134 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 CIB1Q99828 191 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 IFT27Q9BW83 186 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 TSSK6Q9BXA6 273 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 POLDIP3Q9BY77 421 aaKnown RBP11.12□□□□□ -0.63
SND1-209ENST00000470723 GPR35Q9HC97 309 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 NPDC1Q9NQX5 325 aaPredicted RBP11.12□□□□□ -0.63
SND1-209ENST00000470723 GALNT8Q9NY28 637 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 UPB1Q9UBR1 384 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 IL20RAQ9UHF4 553 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 ENOPH1Q9UHY7 261 aa11.12□□□□□ -0.63
SND1-209ENST00000470723 SLC22A23A1A5C7 686 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 PRSS37A4D1T9 235 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 FAM90A27PA6NNH2 459 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 EEF1E1-BLOC1S5C9J1V9 151 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 EEF1E1O43324 174 aaKnown RBP11.11□□□□□ -0.63
SND1-209ENST00000470723 MITFO75030 526 aaPredicted RBP11.11□□□□□ -0.63
SND1-209ENST00000470723 SERPINI2O75830 405 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 HMGN1P05114 100 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 ITGA5P08648 1049 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 UGT2B10P36537 528 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 CSNK1A1P48729 337 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 SLC34A1Q06495 639 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 LGALS3BPQ08380 585 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 FAPQ12884 760 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 MELKQ14680 651 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 GINS1Q14691 196 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 GABRA6Q16445 453 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 NRN1LQ496H8 165 aa11.11□□□□□ -0.63
SND1-209ENST00000470723 MESTQ5EB52 335 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms