RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 STK11Q15831 433 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 HIST3H3Q16695 136 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 RFX4Q33E94 735 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 SFRP5Q5T4F7 317 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 HMBOX1Q6NT76 420 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 FAHD1Q6P587 224 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 THSD4Q6ZMP0 1018 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 DPY19L2P2Q6ZN68 376 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 HIPK1Q86Z02 1210 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 WDFY1Q8IWB7 410 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 DMRTC2Q8IXT2 367 aaPredicted RBP13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 UBE2J2Q8N2K1 259 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 SVOPLQ8N434 492 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 C1orf162Q8NEQ5 155 aaPredicted RBP13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 NOXO1Q8NFA2 376 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 OR5K1Q8NHB7 308 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 ZNF519Q8TB69 540 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 LRTOMTQ8WZ04 291 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 TMEM54Q969K7 222 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 ZNF566Q969W8 418 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 BOD1Q96IK1 185 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 ALKBH3Q96Q83 286 aaPredicted RBP13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 TSPAN32Q96QS1 320 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 EMC6Q9BV81 110 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 KATNB1Q9BVA0 655 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 POLDIP3Q9BY77 421 aaKnown RBP13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 MRPL13Q9BYD1 178 aaKnown RBP13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 GABARAPL1Q9H0R8 117 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 S100A14Q9HCY8 104 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 IL20Q9NYY1 176 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 UPB1Q9UBR1 384 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 A6NIZ1 184 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 UPK3AO75631 287 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 TXNDC12O95881 172 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 ITGA5P08648 1049 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 NR2C1P13056 603 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 PPP3CBP16298 524 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 MPGP29372 298 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 SDHAP31040 664 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 SLC6A6P31641 620 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 RPL4P36578 427 aaKnown RBP13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 CSNK1A1P48729 337 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 SH3BGRP55822 239 aaPredicted RBP13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 RAP1BP61224 184 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 RAP1AP62834 184 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 FAPQ12884 760 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 C1QTNF12Q5T7M4 302 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 GPR139Q6DWJ6 353 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 IGFN1Q86VF2 1251 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 CXorf67Q86X51 503 aaPredicted RBP13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 ZDHHC13Q8IUH4 622 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 HS3ST5Q8IZT8 346 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 ARIH2OSQ8N7S6 290 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 STEAP2Q8NFT2 490 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 STMN2Q93045 179 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 KISS1RQ969F8 398 aaPredicted RBP13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 GTPBP3Q969Y2 492 aaKnown RBP13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 KCNK17Q96T54 332 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 NIPSNAP1Q9BPW8 284 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 B3GAT2Q9NPZ5 323 aa13.15□□□□□ -0.3
CDC42SE1-203ENST00000470278 G3V2T6 193 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 IMPA2O14732 288 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 ARPC3O15145 178 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 AHCYL1O43865 530 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 KRT33AO76009 404 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 ACADSP16219 412 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 RPS6KA3P51812 740 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 ZNF133P52736 654 aaPredicted RBP13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 ROR2Q01974 943 aaKnown RBP13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 TGFBR3Q03167 851 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 LGALS3BPQ08380 585 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 TOP3AQ13472 1001 aaPredicted RBP13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 CAMK2DQ13557 499 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 LINGO2Q7L985 606 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 SSX8Q7RTT4 187 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 AMIGO2Q86SJ2 522 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 ADCK1Q86TW2 530 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 PARP8Q8N3A8 854 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 GPR137CQ8N3F9 429 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 C17orf78Q8N4C9 275 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 ZNF433Q8N7K0 673 aaPredicted RBP13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 OR52L1Q8NGH7 329 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 OR6N1Q8NGY5 312 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 FNDC8Q8TC99 324 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 NMD3Q96D46 503 aaKnown RBP13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 ZNF570Q96NI8 536 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 PKP2Q99959 881 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 ALG12Q9BV10 488 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 OSBPL10Q9BXB5 764 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 ZNF556Q9HAH1 456 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 SMURF2Q9HAU4 748 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 GLTPQ9NZD2 209 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 GRHPRQ9UBQ7 328 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 ZNF346Q9UL40 294 aaKnown RBP13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 ADAM18Q9Y3Q7 739 aa13.14□□□□□ -0.31
CDC42SE1-203ENST00000470278 TUBAL3A6NHL2 446 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 ANKRD65E5RJM6 399 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 IDH3BO43837 385 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 TRMUO75648 421 aaKnown RBP13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 LYZL6O75951 148 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms