RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 NECAB1Q8N987 351 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 OR9K2Q8NGE7 335 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 OR9G1Q8NH87 305 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 TUBGCP3Q96CW5 907 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 TMEM101Q96IK0 257 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 CNN2Q99439 309 aaKnown RBP3.5□□□□□ -1.85
LSM5-209ENST00000468872 SLC7A8Q9UHI5 535 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 NEUROG3Q9Y4Z2 214 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 PEX16Q9Y5Y5 336 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 PTPN23Q9H3S7 1636 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 TPRP12270 2363 aaKnown RBP3.49□□□□□ -1.85
LSM5-209ENST00000468872 ERVK-7P63135 1459 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 PXDNQ92626 1479 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 USP27XA6NNY8 438 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 AP3B1O00203 1094 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 HMMRO75330 724 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 OR7A10O76100 309 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 MMP1P03956 469 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 HPNP05981 417 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 ELK1P19419 428 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 CD1BP29016 333 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 VDAC2P45880 294 aaPredicted RBP3.49□□□□□ -1.85
LSM5-209ENST00000468872 DLX1P56177 255 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 MRPL28Q13084 256 aaKnown RBP3.49□□□□□ -1.85
LSM5-209ENST00000468872 ARFRP1Q13795 201 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 NSDHLQ15738 373 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 LRRC31Q6UY01 552 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 TAS2R42Q7RTR8 314 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 FAM228AQ86W67 206 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 PIANPQ8IYJ0 282 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 C20orf203Q8NBC4 194 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 OR2L3Q8NG85 312 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 ARPC1AQ92747 370 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 TM4SF19Q96DZ7 209 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 TPD52L3Q96J77 140 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 PLEKHA8Q96JA3 519 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 FAIM2Q9BWQ8 316 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 SLC25A22Q9H936 323 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 PDFQ9HBH1 243 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 ZFP14Q9HCL3 533 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 ETNK2Q9NVF9 386 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 GIN1Q9NXP7 522 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 PKD1L3Q7Z443 1732 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 CROCCQ5TZA2 2017 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 PLEKHG1Q9ULL1 1385 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 ARHGAP5Q13017 1502 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 MYO18BQ8IUG5 2567 aa3.49□□□□□ -1.85
LSM5-209ENST00000468872 PAPPAQ13219 1627 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 ADGRL2O95490 1459 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 USP34Q70CQ2 3546 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 TECPR2O15040 1411 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 CRB1P82279 1406 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 EEA1Q15075 1411 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 SPATA31E1Q6ZUB1 1445 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 PPIAL4EA0A075B759 164 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 KIR2DL5BA0A0G2JN68 375 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 KIR2DL5BA0A0G2JPC4 375 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 RBMY1BA6NDE4 496 aaKnown RBP3.48□□□□□ -1.85
LSM5-209ENST00000468872 RBMY1EA6NEQ0 496 aaKnown RBP3.48□□□□□ -1.85
LSM5-209ENST00000468872 A8MUA0 341 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 KRTAP4-16G5E9R7 235 aaPredicted RBP3.48□□□□□ -1.85
LSM5-209ENST00000468872 AGPAT2O15120 278 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 NPIPB7O75200 414 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 C1orf105O95561 183 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 RBMY1DP0C7P1 496 aaKnown RBP3.48□□□□□ -1.85
LSM5-209ENST00000468872 RBMY1A1P0DJD3 496 aaKnown RBP3.48□□□□□ -1.85
LSM5-209ENST00000468872 PPIAL4FP0DN26 164 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 GLP1RP43220 463 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 ATP5IP56385 69 aaPredicted RBP3.48□□□□□ -1.85
LSM5-209ENST00000468872 TAS2R19P59542 299 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 TIMM10P62072 90 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 GNMTQ14749 295 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 ATP6AP1Q15904 470 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 ZNF546Q86UE3 836 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 CDR2LQ86X02 465 aaPredicted RBP3.48□□□□□ -1.85
LSM5-209ENST00000468872 PSTKQ8IV42 348 aaKnown RBP3.48□□□□□ -1.85
LSM5-209ENST00000468872 KIR2DL5AQ8N109 375 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 PNKDQ8N490 385 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 KIR2DL5BQ8NHK3 375 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 PYROXD1Q8WU10 500 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 ZIM3Q96PE6 472 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 LY9Q9HBG7 655 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 NT5MQ9NPB1 228 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 DCAF16Q9NXF7 216 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 QPCTLQ9NXS2 382 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 PISDQ9UG56 409 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 MMP17Q9ULZ9 603 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 DUOX2Q9NRD8 1548 aa3.48□□□□□ -1.85
LSM5-209ENST00000468872 IGLV3-22A0A075B6J6 115 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 CCDC169A6NNP5 214 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 ZNF716A6NP11 495 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 UPK3AO75631 287 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 TMEM50AO95807 157 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 NDUFB10O96000 172 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 IGLV1-47P01700 117 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 ZNF735P0CB33 412 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 UBTFL1P0CB47 393 aaPredicted RBP3.47□□□□□ -1.85
LSM5-209ENST00000468872 TBPP20226 339 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 HTR1EP28566 365 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 ARRB1P49407 418 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 303.6 ms