RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SSX5O60225 188 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 STX10O60499 249 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 PDE5AO76074 875 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 KIAA0754O94854 1291 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 PTBP3O95758 552 aaKnown RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 NUDT14O95848 222 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 IGSF6O95976 241 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 IGLV3-25P01717 112 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 CD99P14209 185 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 CCNB1P14635 433 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 CCNA2P20248 432 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 IL10P22301 178 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 AK4P27144 223 aaPredicted RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 MAPK3P27361 379 aaPredicted RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 HNRNPH3P31942 346 aaKnown RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 GTF2H1P32780 548 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 SLC26A5P58743 744 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 RPS15P62841 145 aaKnown RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 GNA12Q03113 381 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 GABPB1Q06547 395 aaPredicted RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 RAD51Q06609 339 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 ELP6Q0PNE2 266 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 ACSF3Q4G176 576 aaPredicted RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 TMEM52BQ4KMG9 183 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 PAN3Q58A45 887 aaKnown RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 FAM173BQ6P4H8 233 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 WDR74Q6RFH5 385 aaPredicted RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 ISLR2Q6UXK2 745 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 PRSS48Q7RTY5 328 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 GOLGA7Q7Z5G4 137 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 RANBP3LQ86VV4 465 aaPredicted RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 DEFB106AQ8N104 65 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 RNF148Q8N7C7 305 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 FDCSPQ8NFU4 85 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 OR4F17Q8NGA8 305 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 OR2AP1Q8NGE2 309 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 OR52J3Q8NH60 311 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 UBE2Q2Q8WVN8 375 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 DLX4Q92988 240 aaPredicted RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 ISG20Q96AZ6 181 aaKnown RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 VSIG2Q96IQ7 327 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 HSFY1Q96LI6 401 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 OR4F4Q96R69 305 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 OR5M11Q96RB7 305 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 NUDT9Q9BW91 350 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 ILKAPQ9H0C8 392 aaPredicted RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 TMEM231Q9H6L2 316 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 ESM1Q9NQ30 184 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 PLSCR3Q9NRY6 295 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 AGPAT4Q9NRZ5 378 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 SOHLH2Q9NX45 425 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 PRODH2Q9UF12 536 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 CRCT1Q9UGL9 99 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 HPCAL4Q9UM19 191 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 SNX10Q9Y5X0 201 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 FKBP7Q9Y680 259 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 SVILO95425 2214 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 SPTBN1Q01082 2364 aaKnown RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 SETD2Q9BYW2 2564 aaPredicted RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 A0A1B0GUH1 482 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 FRG2CA6NGY1 282 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 C21orf140B9A014 251 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 PDLIM1O00151 329 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 RASGRF2O14827 1237 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 MED7O43513 233 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 KLRC4O43908 158 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 PRPSAP2O60256 369 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 ZMPSTE24O75844 475 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 CD160O95971 181 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 PLEKP08567 350 aaPredicted RBP2.3□□□□□ -2.04
XRN1-206ENST00000467077 PAEPP09466 180 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 EPB41P11171 864 aaKnown RBP2.3□□□□□ -2.04
XRN1-206ENST00000467077 CD1EP15812 388 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 HTR1EP28566 365 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 PRDX2P32119 198 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 ACTR1BP42025 376 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 SULT1E1P49888 294 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 ACTR1AP61163 376 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 RHOAP61586 193 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 ZNF85Q03923 595 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 ZNF33BQ06732 778 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 ENPEPQ07075 957 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 FUT7Q11130 342 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 SNX1Q13596 522 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 STK38Q15208 465 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 LDLRAP1Q5SW96 308 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 SEL1L2Q5TEA6 688 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 RWDD4Q6NW29 188 aaKnown RBP2.3□□□□□ -2.04
XRN1-206ENST00000467077 ZNF544Q6NX49 715 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 PNCKQ6P2M8 343 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 FAM199XQ6PEV8 388 aaPredicted RBP2.3□□□□□ -2.04
XRN1-206ENST00000467077 RBM43Q6ZSC3 357 aaKnown RBP2.3□□□□□ -2.04
XRN1-206ENST00000467077 TMEM110Q86TL2 294 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 SYVN1Q86TM6 617 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 C17orf82Q86X59 251 aaPredicted RBP2.3□□□□□ -2.04
XRN1-206ENST00000467077 ZNF683Q8IZ20 524 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 MINDY2Q8NBR6 621 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 ST6GALNAC3Q8NDV1 305 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 FAM71CQ8NEG0 241 aa2.3□□□□□ -2.04
XRN1-206ENST00000467077 OR56B1Q8NGI3 324 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms