RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 KRT6AP02538 564 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 THY1P04216 161 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 KRT6BP04259 564 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 CRATP43155 626 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 KRT6CP48668 564 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 IDH2P48735 452 aaKnown RBP10.34□□□□□ -0.75
UBR4-210ENST00000466969 GPR68Q15743 365 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 TBC1D28Q2M2D7 210 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 CD276Q5ZPR3 534 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 WDR25Q64LD2 544 aaPredicted RBP10.34□□□□□ -0.75
UBR4-210ENST00000466969 LETMD1Q6P1Q0 360 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 PTGR2Q8N8N7 351 aaPredicted RBP10.34□□□□□ -0.75
UBR4-210ENST00000466969 NPRL2Q8WTW4 380 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 MAGOHBQ96A72 148 aaKnown RBP10.34□□□□□ -0.75
UBR4-210ENST00000466969 PHF21BQ96EK2 531 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 ACPTQ9BZG2 426 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 LRMDAQ9H2I8 198 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 C1orf198Q9H425 327 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 ZCCHC3Q9NUD5 404 aaKnown RBP10.34□□□□□ -0.75
UBR4-210ENST00000466969 ZNF224Q9NZL3 707 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 OSGIN1Q9UJX0 560 aa10.34□□□□□ -0.75
UBR4-210ENST00000466969 A0A1B0GW55 424 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 CCDC189A1A4V9 331 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 MANBAO00462 879 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 MFN2O95140 757 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 ZNF205O95201 554 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 QDPRP09417 244 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 DUX4L2P0CJ85 424 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 DUX4L3P0CJ86 424 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 DUX4L5P0CJ88 424 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 DUX4L6P0CJ89 424 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 DUX4L7P0CJ90 424 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 ZNF26P17031 533 aaPredicted RBP10.33□□□□□ -0.76
UBR4-210ENST00000466969 P2RY4P51582 365 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 AQP5P55064 265 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 ZNF141Q15928 474 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 FAM83EQ2M2I3 478 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 DUX4L9Q6RFH8 374 aaPredicted RBP10.33□□□□□ -0.76
UBR4-210ENST00000466969 NHLRC1Q6VVB1 395 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 CMC1Q7Z7K0 106 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 SNX32Q86XE0 403 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 ANKMY2Q8IV38 441 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 SCAIQ8N9R8 606 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 PNLDC1Q8NA58 520 aaKnown RBP10.33□□□□□ -0.76
UBR4-210ENST00000466969 OR1J2Q8NGS2 313 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 VANGL1Q8TAA9 524 aaPredicted RBP10.33□□□□□ -0.76
UBR4-210ENST00000466969 CIDECQ96AQ7 238 aaPredicted RBP10.33□□□□□ -0.76
UBR4-210ENST00000466969 MSL2Q9HCI7 577 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 DUX4Q9UBX2 424 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 SLC35A3Q9Y2D2 325 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 HIF3AQ9Y2N7 669 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 MAB21L2Q9Y586 359 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 TEX264Q9Y6I9 313 aa10.33□□□□□ -0.76
UBR4-210ENST00000466969 NUP214P35658 2090 aaPredicted RBP10.32□□□□□ -0.76
UBR4-210ENST00000466969 H3BUX3 64 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 AKAP8O43823 692 aaKnown RBP10.32□□□□□ -0.76
UBR4-210ENST00000466969 SASH3O75995 380 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 SNAP29O95721 258 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 PTHP01270 115 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 PATE4P0C8F1 98 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 TACR3P29371 465 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 CRABP2P29373 138 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 PGM1P36871 562 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 MFSD13AQ14CX5 517 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 LY6EQ16553 131 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 SPDYAQ5MJ70 313 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 THEM4Q5T1C6 240 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 FAM219BQ5XKK7 198 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 CAVIN1Q6NZI2 390 aaKnown RBP10.32□□□□□ -0.76
UBR4-210ENST00000466969 EMBQ6PCB8 327 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 ZNF627Q7L945 461 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 LSRQ86X29 649 aaPredicted RBP10.32□□□□□ -0.76
UBR4-210ENST00000466969 SBSPONQ8IVN8 264 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 KDM8Q8N371 416 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 CDKL2Q92772 493 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 MAGEB18Q96M61 343 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 DDOQ99489 341 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 TMEM246Q9BRR3 403 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 B3GAT2Q9NPZ5 323 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 SERTAD4Q9NUC0 356 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 TBK1Q9UHD2 729 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 FAF1Q9UNN5 650 aaPredicted RBP10.32□□□□□ -0.76
UBR4-210ENST00000466969 KCNE3Q9Y6H6 103 aa10.32□□□□□ -0.76
UBR4-210ENST00000466969 FBP2O00757 339 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 OR4F21O95013 312 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 KRT16P08779 473 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 MPV17P39210 176 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 C1DQ13901 141 aaKnown RBP10.31□□□□□ -0.76
UBR4-210ENST00000466969 TEX35Q5T0J7 233 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 SPATA46Q5T0L3 261 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 KLC3Q6P597 504 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 KCTD18Q6PI47 426 aaPredicted RBP10.31□□□□□ -0.76
UBR4-210ENST00000466969 CCDC137Q6PK04 289 aaKnown RBP10.31□□□□□ -0.76
UBR4-210ENST00000466969 VRK2Q86Y07 508 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 LRRC8AQ8IWT6 810 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 ZNF101Q8IZC7 436 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 ARFGAP2Q8N6H7 521 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 ADAMTS16Q8TE57 1224 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 FAM120BQ96EK7 910 aaKnown RBP10.31□□□□□ -0.76
UBR4-210ENST00000466969 TECTBQ96PL2 329 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms