RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 FBXW9Q5XUX1 488 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 LPCAT4Q643R3 524 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 Q6ZT83 130 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 BEND4Q6ZU67 534 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 ABHD12BQ7Z5M8 362 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-205ENST00000466897 ALPK2Q86TB3 2170 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 LIX1LQ8IVB5 337 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 C20orf196Q8IYI0 205 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 NOXO1Q8NFA2 376 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 TMEM54Q969K7 222 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 ZNF775Q96BV0 537 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-205ENST00000466897 Q96M85 177 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 ERMAPQ96PL5 475 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-205ENST00000466897 KCNK17Q96T54 332 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 EMC6Q9BV81 110 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 VCXQ9H320 206 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 C12orf49Q9H741 205 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 IL20RAQ9UHF4 553 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 IER3IP1Q9Y5U9 82 aa13.43□□□□□ -0.26
NPHP4-205ENST00000466897 TEX13CA0A0J9YWL9 993 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 ZAR1LA6NP61 321 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 E9PQ18 207 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 RPL36A-HNRNPH2H7BZ11 118 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 XKRYO14609 159 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 ZG16O60844 167 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 TRMUO75648 421 aaKnown RBP13.42□□□□□ -0.26
NPHP4-205ENST00000466897 IGFBP1P08833 259 aaPredicted RBP13.42□□□□□ -0.26
NPHP4-205ENST00000466897 ACVR1BP36896 505 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 ASCL1P50553 236 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 TOP3AQ13472 1001 aaPredicted RBP13.42□□□□□ -0.26
NPHP4-205ENST00000466897 PTGES3Q15185 160 aaKnown RBP13.42□□□□□ -0.26
NPHP4-205ENST00000466897 MESTQ5EB52 335 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 TSPO2Q5TGU0 170 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 GABRG1Q8N1C3 465 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 FAM26EQ8N5C1 309 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 OR4Q3Q8NH05 313 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 CA5BP1Q8WTZ4 195 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 NMD3Q96D46 503 aaKnown RBP13.42□□□□□ -0.26
NPHP4-205ENST00000466897 TEX12Q9BXU0 123 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 PRRG3Q9BZD7 231 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 GRIP2Q9C0E4 1043 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 RASSF4Q9H2L5 321 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 VCX3BQ9H321 246 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 SLC7A10Q9NS82 523 aa13.42□□□□□ -0.26
NPHP4-205ENST00000466897 MYO18BQ8IUG5 2567 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 H0YJX3 145 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 SMNDC1O75940 238 aaKnown RBP eCLIP13.41□□□□□ -0.26
NPHP4-205ENST00000466897 HMGN1P05114 100 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 COX5AP20674 150 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 EDNRAP25101 427 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 NOS3P29474 1203 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 CSNK1A1P48729 337 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 MYBPC1Q00872 1141 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 RUNX1T1Q06455 604 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 SRSF1Q07955 248 aaKnown RBP eCLIP13.41□□□□□ -0.26
NPHP4-205ENST00000466897 CAMK2DQ13557 499 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 GINS1Q14691 196 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 P2RY6Q15077 328 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 SLX4IPQ5VYV7 408 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 WDFY1Q8IWB7 410 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 ZNF610Q8N9Z0 462 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 HDAC2Q92769 488 aaKnown RBP13.41□□□□□ -0.26
NPHP4-205ENST00000466897 RASD2Q96D21 266 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 BOD1Q96IK1 185 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 OPN3Q9H1Y3 402 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-205ENST00000466897 B3GAT2Q9NPZ5 323 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 CMC2Q9NRP2 79 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 ASB6Q9NWX5 421 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 SMPD3Q9NY59 655 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-205ENST00000466897 ELOVL5Q9NYP7 299 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 GLTPQ9NZD2 209 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 VSX1Q9NZR4 365 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-205ENST00000466897 PRSS50Q9UI38 385 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 KLHL21Q9UJP4 597 aa13.41□□□□□ -0.26
NPHP4-205ENST00000466897 PRSS37A4D1T9 235 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 EEF1E1-BLOC1S5C9J1V9 151 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 ZNF587BE7ETH6 402 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 PYCARD-AS1I3L0S3 204 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 DLGAP1O14490 977 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 EEF1E1O43324 174 aaKnown RBP13.4□□□□□ -0.26
NPHP4-205ENST00000466897 UPK3AO75631 287 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 AGFG2O95081 481 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 CLDN14O95500 239 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 IFNGP01579 166 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 HIST1H1CP16403 213 aaKnown RBP13.4□□□□□ -0.26
NPHP4-205ENST00000466897 POU1F1P28069 291 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 CLRN1P58418 232 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 ITGADQ13349 1161 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 LRRC36Q1X8D7 754 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 ZNF362Q5T0B9 420 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-205ENST00000466897 THEM4Q5T1C6 240 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 C10orf128Q5T292 105 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 C12orf73Q69YU5 71 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 ZNF474Q6S9Z5 364 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-205ENST00000466897 GPR137CQ8N3F9 429 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 OR6N1Q8NGY5 312 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 NRG4Q8WWG1 115 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 LRRC46Q96FV0 321 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 HRASLS5Q96KN8 279 aa13.4□□□□□ -0.26
NPHP4-205ENST00000466897 MBOAT4Q96T53 435 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms