RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 FOXO1Q12778 655 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 MFAP5Q13361 173 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 FHL1Q13642 323 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 TBRG1Q3YBR2 411 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 CNIH2Q6PI25 160 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 SULF2Q8IWU5 870 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 SAMD8Q96LT4 415 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 TNFRSF13CQ96RJ3 184 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 UBQLN3Q9H347 655 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 RERGLQ9H628 205 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 HINT3Q9NQE9 182 aaKnown RBP16.75■□□□□ 0.27
CAPN3-209ENST00000466222 COMMD3Q9UBI1 195 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 SSUH2Q9Y2M2 353 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 ZIC3O60481 467 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 RGS9O75916 674 aaPredicted RBP16.74■□□□□ 0.27
CAPN3-209ENST00000466222 ADRB1P08588 477 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 SLC2A2P11168 524 aaPredicted RBP16.74■□□□□ 0.27
CAPN3-209ENST00000466222 CELP19835 753 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 CNR1P21554 472 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 DPP4P27487 766 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 CD79BP40259 229 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 MTNR1BP49286 362 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 DBPQ10586 325 aaPredicted RBP16.74■□□□□ 0.27
CAPN3-209ENST00000466222 TOMM20Q15388 145 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 TRAM1Q15629 374 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 THSD4Q6ZMP0 1018 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 ACBD7Q8N6N7 88 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 TMEM234Q8WY98 164 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 ST8SIA1Q92185 356 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 OTULINQ96BN8 352 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 TMEM41AQ96HV5 264 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 ARL5BQ96KC2 179 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 PTGES2Q9H7Z7 377 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 H3BML4 177 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 PLA2G10O15496 165 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 RCBTB2O95199 551 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 PLA2G5P39877 138 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 ARG2P78540 354 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 NIPAL3Q6P499 406 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 MEPCEQ7L2J0 689 aaKnown RBP16.74■□□□□ 0.27
CAPN3-209ENST00000466222 GALNTL5Q7Z4T8 443 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 CPOQ8IVL8 374 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 CDK20Q8IZL9 346 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 C10orf53Q8N6V4 93 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 ZFP41Q8N8Y5 198 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 MDS2Q8NDY4 140 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 DUSP18Q8NEJ0 188 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 FANK1Q8TC84 345 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 SGTBQ96EQ0 304 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 TMEM43Q9BTV4 400 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 TMED9Q9BVK6 235 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.74■□□□□ 0.27
CAPN3-209ENST00000466222 MMP28Q9H239 520 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 OR52D1Q9H346 318 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 RBFOX1Q9NWB1 397 aaKnown RBP16.74■□□□□ 0.27
CAPN3-209ENST00000466222 SIGLEC7Q9Y286 467 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 RAXQ9Y2V3 346 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 IGF2RP11717 2491 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 HEATR5AQ86XA9 2040 aa16.74■□□□□ 0.27
CAPN3-209ENST00000466222 ETV2O00321 342 aaPredicted RBP16.73■□□□□ 0.27
CAPN3-209ENST00000466222 BMP7P18075 431 aa16.73■□□□□ 0.27
CAPN3-209ENST00000466222 MRPS15P82914 257 aaKnown RBP16.73■□□□□ 0.27
CAPN3-209ENST00000466222 PLET1Q6UQ28 207 aa16.73■□□□□ 0.27
CAPN3-209ENST00000466222 OAFQ86UD1 273 aa16.73■□□□□ 0.27
CAPN3-209ENST00000466222 SLC43A2Q8N370 569 aa16.73■□□□□ 0.27
CAPN3-209ENST00000466222 Q8N402 240 aa16.73■□□□□ 0.27
CAPN3-209ENST00000466222 OR2M7Q8NG81 312 aa16.73■□□□□ 0.27
CAPN3-209ENST00000466222 HAS2Q92819 552 aa16.73■□□□□ 0.27
CAPN3-209ENST00000466222 KCTD12Q96CX2 325 aaKnown RBP16.73■□□□□ 0.27
CAPN3-209ENST00000466222 PTDSS2Q9BVG9 487 aa16.73■□□□□ 0.27
CAPN3-209ENST00000466222 C12orf10Q9HB07 376 aa16.73■□□□□ 0.27
CAPN3-209ENST00000466222 CHRNA9Q9UGM1 479 aa16.73■□□□□ 0.27
CAPN3-209ENST00000466222 TFECO14948 347 aaPredicted RBP16.72■□□□□ 0.27
CAPN3-209ENST00000466222 RNF13O43567 381 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 NPIPB7O75200 414 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 PTP4A3O75365 173 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 CBR3O75828 277 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 YES1P07947 543 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 SP1P08047 785 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 SHC1P29353 583 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 KIR2DL3P43628 341 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 TLE3Q04726 772 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 CDK10Q15131 360 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 ZNF74Q16587 644 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 YRDCQ86U90 279 aaKnown RBP16.72■□□□□ 0.27
CAPN3-209ENST00000466222 KLBQ86Z14 1044 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 LNX2Q8N448 690 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 BBS1Q8NFJ9 593 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 SLC25A36Q96CQ1 311 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 HDHD5Q9BXW7 423 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 MCCC2Q9HCC0 563 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 BABAM2Q9NXR7 383 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 BAIAP2Q9UQB8 552 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 LINC00854A0A1B0GVQ3 168 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 SLC22A31A6NKX4 558 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 HPGDSO60760 199 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 HK1P19367 917 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 APOBEC1P41238 236 aaKnown RBP16.72■□□□□ 0.27
CAPN3-209ENST00000466222 DSCR4P56555 118 aaPredicted RBP16.72■□□□□ 0.27
CAPN3-209ENST00000466222 TAS2R43P59537 309 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms