RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 FAM20BO75063 409 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 AKR7A3O95154 331 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 CLPTM1O96005 669 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 IGHG3P01860 377 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 OPN1LWP04000 364 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 STSP08842 583 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 CLUP10909 449 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 C21orf33P30042 268 aaPredicted RBP7.86□□□□□ -1.15
UBA3-208ENST00000465627 SFTPDP35247 375 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 RFC3P40938 356 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 RPL5P46777 297 aaKnown RBP7.86□□□□□ -1.15
UBA3-208ENST00000465627 UQCRFS1P47985 274 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 SLC25A1P53007 311 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 NR1H2P55055 460 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 CLDN18P56856 261 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 RPL27P61353 136 aaKnown RBP7.86□□□□□ -1.15
UBA3-208ENST00000465627 EMX1Q04741 257 aaPredicted RBP7.86□□□□□ -1.15
UBA3-208ENST00000465627 RUNX1T1Q06455 604 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.86□□□□□ -1.15
UBA3-208ENST00000465627 PUDPQ08623 228 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 PMS2P3Q13401 168 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 TMED1Q13445 227 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 GGTLC2Q14390 218 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 POU4F3Q15319 338 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 ACKR1Q16570 336 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 FOXB2Q5VYV0 432 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 PLBD1Q6P4A8 553 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 CXXC5Q7LFL8 322 aaKnown RBP7.86□□□□□ -1.15
UBA3-208ENST00000465627 PXKQ7Z7A4 578 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 FAM109AQ8N4B1 249 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 C10orf53Q8N6V4 93 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 TMEM99Q8N816 258 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 TMEM178AQ8NBL3 297 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 ZNF485Q8NCK3 441 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 ZNF540Q8NDQ6 660 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 ATP6V1C2Q8NEY4 427 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 OR52E2Q8NGJ4 325 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 OR52I1Q8NGK6 324 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 OR4K13Q8NH42 304 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 FAR1Q8WVX9 515 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 ASB10Q8WXI3 467 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 LGALS12Q96DT0 336 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 KLHL15Q96M94 604 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 OR5B2Q96R09 309 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 NMNAT3Q96T66 252 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 TIMP4Q99727 224 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 MDFIQ99750 246 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 ASPNQ9BXN1 380 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 SRXN1Q9BYN0 137 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 RBM38Q9H0Z9 239 aaKnown RBP7.86□□□□□ -1.15
UBA3-208ENST00000465627 TSPAN10Q9H1Z9 355 aaPredicted RBP7.86□□□□□ -1.15
UBA3-208ENST00000465627 CCNB1IP1Q9NPC3 277 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 BATF3Q9NR55 127 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 INIPQ9NRY2 104 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 SCN3BQ9NY72 215 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 VSX1Q9NZR4 365 aaPredicted RBP7.86□□□□□ -1.15
UBA3-208ENST00000465627 ITGB1BP2Q9UKP3 347 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 ZNF346Q9UL40 294 aaKnown RBP7.86□□□□□ -1.15
UBA3-208ENST00000465627 PCDHGB7Q9Y5F8 929 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 DCHS2Q6V1P9 2916 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 CSPG4Q6UVK1 2322 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 ESPL1Q14674 2120 aa7.86□□□□□ -1.15
UBA3-208ENST00000465627 PRRC2CQ9Y520 2896 aaKnown RBP7.85□□□□□ -1.15
UBA3-208ENST00000465627 RIIAD1A6NNX1 92 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 DCTN6O00399 190 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 MSTNO14793 375 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 SMAD9O15198 467 aaKnown RBP7.85□□□□□ -1.15
UBA3-208ENST00000465627 RGS10O43665 173 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 WISP2O76076 250 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 HIST1H2ABP04908 130 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 ADORA3P0DMS8 318 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 TFPIP10646 304 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 ATP6V1B1P15313 513 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 ZNF708P17019 499 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 ZNF3P17036 446 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 RPL4P36578 427 aaKnown RBP7.85□□□□□ -1.15
UBA3-208ENST00000465627 RAC3P60763 192 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 PPIAP62937 165 aaKnown RBP7.85□□□□□ -1.15
UBA3-208ENST00000465627 SLC35A1P78382 337 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 PMP22Q01453 160 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 ST3GAL4Q11206 333 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 KRR1Q13601 381 aaKnown RBP7.85□□□□□ -1.15
UBA3-208ENST00000465627 TBCEQ15813 527 aaPredicted RBP7.85□□□□□ -1.15
UBA3-208ENST00000465627 BCL2A1Q16548 175 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 TBR1Q16650 682 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 NADK2Q4G0N4 442 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 UBE2UQ5VVX9 321 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 ESPNLQ6ZVH7 1005 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 KCTD8Q6ZWB6 473 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 AHSA2Q719I0 299 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 MEPCEQ7L2J0 689 aaKnown RBP7.85□□□□□ -1.15
UBA3-208ENST00000465627 HIST3H2AQ7L7L0 130 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 ZBTB46Q86UZ6 589 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 GID4Q8IVV7 300 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 SIAH3Q8IW03 269 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 KDM8Q8N371 416 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 RBMXL3Q8N7X1 1067 aaKnown RBP7.85□□□□□ -1.15
UBA3-208ENST00000465627 CYB561A3Q8NBI2 242 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 SDR9C7Q8NEX9 313 aa7.85□□□□□ -1.15
UBA3-208ENST00000465627 OR14L1PQ8NHC6 308 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms