RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 EPS15P42566 896 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 CRYBB2P43320 205 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 CRISP3P54108 245 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 KIAA0087Q14695 138 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 ZMYND11Q15326 602 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 BOLA3Q53S33 107 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 PIGGQ5H8A4 983 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 Q6ZN92 141 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 ZNF571Q7Z3V5 609 aaPredicted RBP2.31□□□□□ -2.04
SMC4-205ENST00000465563 CDR2LQ86X02 465 aaPredicted RBP2.31□□□□□ -2.04
SMC4-205ENST00000465563 PSTKQ8IV42 348 aaKnown RBP2.31□□□□□ -2.04
SMC4-205ENST00000465563 MYOCDQ8IZQ8 938 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 CYB561D1Q8N8Q1 229 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 VN1R2Q8NFZ6 395 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 OR1L6Q8NGR2 347 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 UBALD1Q8TB05 177 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 FRZBQ92765 325 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 MS4A4EQ96PG1 132 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 FMO2Q99518 471 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 HDHD3Q9BSH5 251 aaPredicted RBP2.31□□□□□ -2.04
SMC4-205ENST00000465563 NAT9Q9BTE0 207 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 GCOM2Q9BZD3 368 aaPredicted RBP2.31□□□□□ -2.04
SMC4-205ENST00000465563 RANBP3Q9H6Z4 567 aaPredicted RBP2.31□□□□□ -2.04
SMC4-205ENST00000465563 METTL7AQ9H8H3 244 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 PLGRKTQ9HBL7 147 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 NT5MQ9NPB1 228 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 IL26Q9NPH9 171 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 TRAF3IP3Q9Y228 551 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 CDHR2Q9BYE9 1310 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 FANCIQ9NVI1 1328 aa2.31□□□□□ -2.04
SMC4-205ENST00000465563 COLCA2A8K830 154 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 UPK3AO75631 287 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 TMEM50AO95807 157 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 SERPINA3P01011 423 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 DCNP07585 359 aaKnown RBP2.3□□□□□ -2.04
SMC4-205ENST00000465563 RNASE2P10153 161 aaKnown RBP2.3□□□□□ -2.04
SMC4-205ENST00000465563 CELP19835 753 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 KITLGP21583 273 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 GYG1P46976 350 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 ACVR1Q04771 509 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 MRPL28Q13084 256 aaKnown RBP2.3□□□□□ -2.04
SMC4-205ENST00000465563 CYTH1Q15438 398 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 RABL6Q3YEC7 729 aaPredicted RBP2.3□□□□□ -2.04
SMC4-205ENST00000465563 TMEM255AQ5JRV8 349 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 VAX1Q5SQQ9 334 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 RUFY3Q7L099 469 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 ACOT4Q8N9L9 421 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 PYROXD1Q8WU10 500 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 GIMAP1Q8WWP7 306 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 NDRG1Q92597 394 aaKnown RBP2.3□□□□□ -2.04
SMC4-205ENST00000465563 SMARCD2Q92925 531 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 PLEKHA8Q96JA3 519 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 TCEANC2Q96MN5 208 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 ZFP14Q9HCL3 533 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 CALYQ9NYX4 217 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 SUN2Q9UH99 717 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 SLC7A8Q9UHI5 535 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 MMP17Q9ULZ9 603 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 HPCAL4Q9UM19 191 aa2.3□□□□□ -2.04
SMC4-205ENST00000465563 XKRY2A2RUG3 117 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 CCDC182A6NF36 153 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 GOLGA8SH3BPF8 625 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 BET1O15155 118 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 SLC31A2O15432 143 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 TNFSF13O75888 250 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 CRYGBP07316 175 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 UBTFL1P0CB47 393 aaPredicted RBP2.29□□□□□ -2.04
SMC4-205ENST00000465563 SLC2A3P11169 496 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 PBLDP30039 288 aaPredicted RBP2.29□□□□□ -2.04
SMC4-205ENST00000465563 FMO3P31513 532 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 TPMTP51580 245 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 PLP1P60201 277 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 BST2Q10589 180 aaKnown RBP2.29□□□□□ -2.04
SMC4-205ENST00000465563 PDIA2Q13087 525 aaKnown RBP2.29□□□□□ -2.04
SMC4-205ENST00000465563 TRIM40Q6P9F5 258 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 C6orf89Q6UWU4 347 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 TGIF2LXQ8IUE1 241 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 FNDC5Q8NAU1 212 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 OR4F6Q8NGB9 312 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 OR10G9Q8NGN4 311 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 FBXO32Q969P5 355 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 OR8B4Q96RC9 309 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 GPR61Q9BZJ8 451 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 GBA3Q9H227 469 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 KCNIP1Q9NZI2 227 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 PISDQ9UG56 409 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 SLC25A15Q9Y619 301 aa2.29□□□□□ -2.04
SMC4-205ENST00000465563 IGKV1D-13A0A0B4J2D9 117 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 C12orf71A8MTZ7 269 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 SNX4O95219 450 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 NDUFB10O96000 172 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 CST1P01037 141 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 PNMA6AP0CW24 399 aaPredicted RBP2.28□□□□□ -2.04
SMC4-205ENST00000465563 IGKV1-13P0DP09 117 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 FGF8P55075 233 aaPredicted RBP2.28□□□□□ -2.04
SMC4-205ENST00000465563 FBXW4P57775 412 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 ACTR3P61158 418 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 ERVK-25P63136 954 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 PSG5Q15238 335 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 IMMTQ16891 758 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms