RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ADAD1Q96M93 576 aaKnown RBP10.21□□□□□ -0.77
CUX1-207ENST00000465461 ULBP2Q9BZM5 246 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 TXNIPQ9H3M7 391 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 PLEKHF2Q9H8W4 249 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 GLTPQ9NZD2 209 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 TMCC3Q9ULS5 477 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 SIGLEC7Q9Y286 467 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 TMEM5Q9Y2B1 443 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 ADAM18Q9Y3Q7 739 aa10.21□□□□□ -0.77
CUX1-207ENST00000465461 UNC79Q9P2D8 2635 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 IGKV1D-43A0A0B4J1Z2 117 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 TCRBV3S1A0A5B6 114 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 HTR3EA5X5Y0 456 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 H7C1C5 153 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 IMPA2O14732 288 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 CCNB2O95067 398 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 SLC2A10O95528 541 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 CST1P01037 141 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 GASTP01350 101 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 QDPRP09417 244 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 DAP3P51398 398 aaKnown RBP10.2□□□□□ -0.78
CUX1-207ENST00000465461 HMGA2P52926 109 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 RPL27P61353 136 aaKnown RBP10.2□□□□□ -0.78
CUX1-207ENST00000465461 LCN6P62502 163 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 TGFBR3Q03167 851 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 BSPH1Q075Z2 132 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 SPOCK1Q08629 439 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 DBPQ10586 325 aaPredicted RBP10.2□□□□□ -0.78
CUX1-207ENST00000465461 NCMAPQ5T1S8 102 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 PGBD2Q6P3X8 592 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 ANKRD16Q6P6B7 361 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 KLHL24Q6TFL4 600 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 TMEM179BQ7Z7N9 219 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 P2RY8Q86VZ1 359 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 C1orf162Q8NEQ5 155 aaPredicted RBP10.2□□□□□ -0.78
CUX1-207ENST00000465461 NOXO1Q8NFA2 376 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 GNPDA2Q8TDQ7 276 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 NSMAFQ92636 917 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 MCHR2Q969V1 340 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 UTP4Q969X6 686 aaKnown RBP10.2□□□□□ -0.78
CUX1-207ENST00000465461 Q96M85 177 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 KATNB1Q9BVA0 655 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 MRPL13Q9BYD1 178 aaKnown RBP10.2□□□□□ -0.78
CUX1-207ENST00000465461 REEP1Q9H902 201 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 UBTD1Q9HAC8 227 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 B3GAT2Q9NPZ5 323 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.2□□□□□ -0.78
CUX1-207ENST00000465461 ITGB1BP2Q9UKP3 347 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 POFUT2Q9Y2G5 429 aa10.2□□□□□ -0.78
CUX1-207ENST00000465461 SAMHD1Q9Y3Z3 626 aaKnown RBP10.2□□□□□ -0.78
CUX1-207ENST00000465461 ANKHD1Q8IWZ3 2542 aaKnown RBP10.2□□□□□ -0.78
CUX1-207ENST00000465461 ZNF99A8MXY4 864 aaPredicted RBP10.19□□□□□ -0.78
CUX1-207ENST00000465461 EBAG9O00559 213 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 ARHGEF9O43307 516 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 FKBP6O75344 327 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 TIPRLO75663 272 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 KRT36O76013 467 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 NDUFB2O95178 105 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 IGHG1P01857 330 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 IGFBP1P08833 259 aaPredicted RBP10.19□□□□□ -0.78
CUX1-207ENST00000465461 PATE4P0C8F1 98 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 B4GALT1P15291 398 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 HOXC12P31275 282 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 CDAP32320 146 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 CAPZA2P47755 286 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 PRPS1P60891 318 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 UBE2NP61088 152 aaKnown RBP10.19□□□□□ -0.78
CUX1-207ENST00000465461 PIGFQ07326 219 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 CCNIQ14094 377 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 HIST3H3Q16695 136 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 C1orf146Q5VVC0 180 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 ADAM5Q6NVV9 412 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 C1orf94Q6P1W5 598 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 ZNF813Q6ZN06 617 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 C17orf78Q8N4C9 275 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 KBTBD8Q8NFY9 601 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 LILRB1Q8NHL6 650 aaPredicted RBP10.19□□□□□ -0.78
CUX1-207ENST00000465461 FGFBP3Q8TAT2 258 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 ZNF519Q8TB69 540 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 GTPBP3Q969Y2 492 aaKnown RBP10.19□□□□□ -0.78
CUX1-207ENST00000465461 RASD2Q96D21 266 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 FOXB1Q99853 325 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 USB1Q9BQ65 265 aaKnown RBP10.19□□□□□ -0.78
CUX1-207ENST00000465461 EGLN3Q9H6Z9 239 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 SEC61A2Q9H9S3 476 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 NOX3Q9HBY0 568 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 KRCC1Q9NPI7 259 aaPredicted RBP10.19□□□□□ -0.78
CUX1-207ENST00000465461 PLEKHA6Q9Y2H5 1048 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 AMDHD2Q9Y303 409 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 IER3IP1Q9Y5U9 82 aa10.19□□□□□ -0.78
CUX1-207ENST00000465461 TEX13CA0A0J9YWL9 993 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 GNGT2O14610 69 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 ABCD4O14678 606 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 DHHO43323 396 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 PPP1R3DO95685 299 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 IGHMP01871 453 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 HLA-HP01893 362 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 CD3EP07766 207 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 CD14P08571 375 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 CELA3BP08861 270 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms