RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 SERPINI2O75830 405 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 GLCEO94923 617 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 CD14P08571 375 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 CCL3P10147 92 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 ITGA3P26006 1051 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 CDKN2AP42771 156 aaKnown RBP13.09□□□□□ -0.31
COL5A1-205ENST00000464187 OR10A3P58181 314 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 CBX3Q13185 183 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 SNTA1Q13424 505 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 CDK5R1Q15078 307 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 ALG10Q5BKT4 473 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 IDNKQ5T6J7 187 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 LINC01590Q5TEZ4 76 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 TMEM81Q6P7N7 255 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 AKAP14Q86UN6 197 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 EXD3Q8N9H8 876 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 LSM14AQ8ND56 463 aaKnown RBP13.09□□□□□ -0.31
COL5A1-205ENST00000464187 OR6K6Q8NGW6 343 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 PAQR8Q8TEZ7 354 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 ACOT12Q8WYK0 555 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 GHSRQ92847 366 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 C11orf54Q9H0W9 315 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-205ENST00000464187 SH2D2AQ9NP31 389 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 SDHAF3Q9NRP4 125 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 MED11Q9P086 117 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 PCDHGB7Q9Y5F8 929 aa13.09□□□□□ -0.31
COL5A1-205ENST00000464187 A0A0G2JK05 382 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 NKX2-8O15522 239 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 CDC40O60508 579 aaKnown RBP eCLIP13.08□□□□□ -0.32
COL5A1-205ENST00000464187 HLA-DQB1P01920 261 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 SPINK2P20155 84 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 MYL9P24844 172 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 THBS2P35442 1172 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 GDI2P50395 445 aaKnown RBP13.08□□□□□ -0.32
COL5A1-205ENST00000464187 CTXN1P60606 82 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 CLN3Q13286 438 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 RIN1Q13671 783 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 QPRTQ15274 297 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 INPP5JQ15735 1006 aaPredicted RBP13.08□□□□□ -0.32
COL5A1-205ENST00000464187 SLC22A10Q63ZE4 541 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 MDGA2Q7Z553 956 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 JAZF1Q86VZ6 243 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 BEST3Q8N1M1 668 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 TAAR8Q969N4 342 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 SMIM19Q96E16 107 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 SGCZQ96LD1 299 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 B3GAT2Q9NPZ5 323 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 RPRD1BQ9NQG5 326 aaKnown RBP13.08□□□□□ -0.32
COL5A1-205ENST00000464187 TAS2R10Q9NYW0 307 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 STMN3Q9NZ72 180 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 TEKT2Q9UIF3 430 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 ADAM30Q9UKF2 790 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 HRH3Q9Y5N1 445 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 LOC400499M0QZD8 3231 aa13.08□□□□□ -0.32
COL5A1-205ENST00000464187 SPTBN2O15020 2390 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 ANKUB1A6NFN9 424 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 SLC19A2O60779 497 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 PRKAR1AP10644 381 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 APEHP13798 732 aaKnown RBP13.07□□□□□ -0.32
COL5A1-205ENST00000464187 ELK1P19419 428 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 PTBP1P26599 531 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL5A1-205ENST00000464187 SDHAP31040 664 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 GBX2P52951 348 aaPredicted RBP13.07□□□□□ -0.32
COL5A1-205ENST00000464187 SLC25A1P53007 311 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 SUMO3P55854 103 aaPredicted RBP13.07□□□□□ -0.32
COL5A1-205ENST00000464187 OR2B6P58173 313 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 RPL18Q07020 188 aaKnown RBP13.07□□□□□ -0.32
COL5A1-205ENST00000464187 IL18Q14116 193 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 ACSM3Q53FZ2 586 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 AGAP6Q5VW22 663 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 SFXN4Q6P4A7 337 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 NANOGNBQ7Z5D8 188 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 UBQLNLQ8IYU4 475 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 TEX19Q8NA77 164 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 THAP4Q8WY91 577 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 AGAP4Q96P64 663 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 SLC22A4Q9H015 551 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 ACOXLQ9NUZ1 547 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 GNG8Q9UK08 70 aa13.07□□□□□ -0.32
COL5A1-205ENST00000464187 IGLV3-32A0A0A0MS00 114 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 ARGFXA6NJG6 315 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 FAM171A2A8MVW0 826 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 PLA2G10O15496 165 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 WISP1O95388 367 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 TXNDC12O95881 172 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 F13BP05160 661 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 GP1BBP13224 206 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 WT1P19544 449 aaPredicted RBP13.06□□□□□ -0.32
COL5A1-205ENST00000464187 MSX1P28360 303 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 RPS5P46782 204 aaKnown RBP13.06□□□□□ -0.32
COL5A1-205ENST00000464187 CYB561P49447 251 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 SIRPAP78324 504 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 POMZP3Q6PJE2 187 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 TPRA1Q86W33 373 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 Q8N402 240 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 MS4A15Q8N5U1 240 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 WDSUB1Q8N9V3 476 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 SNX33Q8WV41 574 aa13.06□□□□□ -0.32
COL5A1-205ENST00000464187 KCTD12Q96CX2 325 aaKnown RBP13.06□□□□□ -0.32
COL5A1-205ENST00000464187 FRMD6Q96NE9 622 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms