RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 AGKQ53H12 422 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 TMEM53Q6P2H8 277 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 TTC33Q6PID6 262 aaPredicted RBP13.24□□□□□ -0.29
SKA3-204ENST00000462482 SLC35D2Q76EJ3 337 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 DPPA2Q7Z7J5 298 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 COMTD1Q86VU5 262 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 TEX29Q8N6K0 151 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 C11orf65Q8NCR3 313 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 SNX33Q8WV41 574 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 ZNF566Q969W8 418 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 TLCD1Q96CP7 247 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 C1orf159Q96HA4 380 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 RABEP2Q9H5N1 569 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 NARFLQ9H6Q4 476 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 RNF121Q9H920 327 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 TMBIM4Q9HC24 238 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 SLAMF8Q9P0V8 285 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 GMEB1Q9Y692 573 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 A0A0A6YYJ9 748 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 LRRN3E7EW58 273 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 PPIHO43447 177 aaKnown RBP13.23□□□□□ -0.29
SKA3-204ENST00000462482 CHP2O43745 196 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 PTHP01270 115 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 SERPINA5P05154 406 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 GPX2P18283 190 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 MRPS11P82912 194 aaKnown RBP13.23□□□□□ -0.29
SKA3-204ENST00000462482 RBBP4Q09028 425 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 PAGE3Q5JUK9 113 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 ELFN2Q5R3F8 820 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 RGS7BPQ6MZT1 257 aaPredicted RBP13.23□□□□□ -0.29
SKA3-204ENST00000462482 TMEM154Q6P9G4 183 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 C12orf54Q6X4T0 127 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 FUNDC1Q8IVP5 155 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 SLC22A24Q8N4F4 322 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 SMYD1Q8NB12 490 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 OR1J2Q8NGS2 313 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 OR6X1Q8NH79 312 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 SLC26A7Q8TE54 656 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 LRMDAQ9H2I8 198 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 C1orf198Q9H425 327 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 ZNF385DQ9H6B1 395 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 METTL17Q9H7H0 456 aaPredicted RBP13.23□□□□□ -0.29
SKA3-204ENST00000462482 CDH20Q9HBT6 801 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 NANSQ9NR45 359 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 GLTPQ9NZD2 209 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 FZR1Q9UM11 496 aa13.23□□□□□ -0.29
SKA3-204ENST00000462482 MFN2O95140 757 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 CH25HO95992 272 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 HPXP02790 462 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 MT-ND5P03915 603 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 MSMBP08118 114 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 IGFBP1P08833 259 aaPredicted RBP13.22□□□□□ -0.29
SKA3-204ENST00000462482 UMPSP11172 480 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 ANPEPP15144 967 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 ATP4BP51164 291 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 SEC24CP53992 1094 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 PLP2Q04941 152 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 MAD2L1BPQ15013 274 aaPredicted RBP13.22□□□□□ -0.29
SKA3-204ENST00000462482 FXNQ16595 210 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 MOGQ16653 247 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 SLC36A2Q495M3 483 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 SLC30A8Q8IWU4 369 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 SKA3Q8IX90 412 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 C10orf111Q8N326 155 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 SLC30A7Q8NEW0 376 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 OR51F2Q8NH61 342 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 CLDND2Q8NHS1 167 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 DYDC1Q8WWB3 177 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 TMEM54Q969K7 222 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 TMEM186Q96B77 213 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 SLC25A44Q96H78 314 aaPredicted RBP13.22□□□□□ -0.29
SKA3-204ENST00000462482 LPAR2Q9HBW0 351 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 HIF1ANQ9NWT6 349 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 SLCO1C1Q9NYB5 712 aa13.22□□□□□ -0.29
SKA3-204ENST00000462482 LEF1Q9UJU2 399 aaPredicted RBP13.22□□□□□ -0.29
SKA3-204ENST00000462482 HEATR1Q9H583 2144 aaKnown RBP13.21□□□□□ -0.29
SKA3-204ENST00000462482 TRBV5-3A0A0A0MS03 114 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 IQCMA0A1B0GVH7 501 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 CPSF4LA6NMK7 179 aaKnown RBP13.21□□□□□ -0.29
SKA3-204ENST00000462482 M0R3H8 397 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 ANGPT2O15123 496 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 DHHO43323 396 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 BCL10O95999 233 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 LCKP06239 509 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 COL8A2P25067 703 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 ZNF84P51523 738 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 KLF3P57682 345 aaPredicted RBP13.21□□□□□ -0.29
SKA3-204ENST00000462482 TEKQ02763 1124 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 ZP4Q12836 540 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 TBC1D28Q2M2D7 210 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 PCGF3Q3KNV8 242 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 MMEL1Q495T6 779 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 NHLRC1Q6VVB1 395 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 HDDC2Q7Z4H3 204 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 DHDDSQ86SQ9 333 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 PATL1Q86TB9 770 aaKnown RBP13.21□□□□□ -0.29
SKA3-204ENST00000462482 LRP11Q86VZ4 500 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 SYNPRQ8TBG9 265 aa13.21□□□□□ -0.29
SKA3-204ENST00000462482 ZNF418Q8TF45 676 aaPredicted RBP13.21□□□□□ -0.29
SKA3-204ENST00000462482 C11orf40Q8WZ69 217 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms