RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SSX8Q7RTT4 187 aa19.78■□□□□ 0.76
C9orf3-209ENST00000460573 HIPK1Q86Z02 1210 aa19.78■□□□□ 0.76
C9orf3-209ENST00000460573 CLDN22Q8N7P3 220 aa19.78■□□□□ 0.76
C9orf3-209ENST00000460573 FANK1Q8TC84 345 aa19.78■□□□□ 0.76
C9orf3-209ENST00000460573 LRTOMTQ8WZ04 291 aa19.78■□□□□ 0.76
C9orf3-209ENST00000460573 CENPNQ96H22 339 aaPredicted RBP19.78■□□□□ 0.76
C9orf3-209ENST00000460573 FEVQ99581 238 aa19.78■□□□□ 0.76
C9orf3-209ENST00000460573 KATNB1Q9BVA0 655 aa19.78■□□□□ 0.76
C9orf3-209ENST00000460573 GRHPRQ9UBQ7 328 aa19.78■□□□□ 0.76
C9orf3-209ENST00000460573 ZNF346Q9UL40 294 aaKnown RBP19.78■□□□□ 0.76
C9orf3-209ENST00000460573 CIB4A0PJX0 185 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 PGA4P0DJD7 388 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 PGA3P0DJD8 388 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 APEHP13798 732 aaKnown RBP19.77■□□□□ 0.76
C9orf3-209ENST00000460573 SLC6A6P31641 620 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 CCKARP32238 428 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 RPS6KA3P51812 740 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 SH3BGRP55822 239 aaPredicted RBP19.77■□□□□ 0.76
C9orf3-209ENST00000460573 FXYD6P3P58550 94 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 C1QTNF12Q5T7M4 302 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 ZNF620Q6ZNG0 422 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 CDH24Q86UP0 819 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 IGFN1Q86VF2 1251 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 P2RY8Q86VZ1 359 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 C1orf162Q8NEQ5 155 aaPredicted RBP19.77■□□□□ 0.76
C9orf3-209ENST00000460573 FNDC8Q8TC99 324 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 FAM222BQ8WU58 562 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 DNAJC9Q8WXX5 260 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 TMEM54Q969K7 222 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 GTPBP3Q969Y2 492 aaKnown RBP19.77■□□□□ 0.76
C9orf3-209ENST00000460573 BOD1Q96IK1 185 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 DACH2Q96NX9 599 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 MRPL13Q9BYD1 178 aaKnown RBP19.77■□□□□ 0.76
C9orf3-209ENST00000460573 ZNF556Q9HAH1 456 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 GPR35Q9HC97 309 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 IL20Q9NYY1 176 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 GLTPQ9NZD2 209 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 KCNN3Q9UGI6 736 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 CDH10Q9Y6N8 788 aa19.77■□□□□ 0.76
C9orf3-209ENST00000460573 FREM1Q5H8C1 2179 aa19.77■□□□□ 0.75
C9orf3-209ENST00000460573 LRBAP50851 2863 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 IMPA2O14732 288 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 ENTPD5O75356 428 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 TRMUO75648 421 aaKnown RBP19.76■□□□□ 0.75
C9orf3-209ENST00000460573 LYZL6O75951 148 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 ITGA5P08648 1049 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 ACVR1BP36896 505 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 CLRN1P58418 232 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 ROR2Q01974 943 aaKnown RBP19.76■□□□□ 0.75
C9orf3-209ENST00000460573 TOP3AQ13472 1001 aaPredicted RBP19.76■□□□□ 0.75
C9orf3-209ENST00000460573 THSD4Q6ZMP0 1018 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 SVOPLQ8N434 492 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 ARIH2OSQ8N7S6 290 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 OR52L1Q8NGH7 329 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 MUS81Q96NY9 551 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 ALKBH3Q96Q83 286 aaPredicted RBP19.76■□□□□ 0.75
C9orf3-209ENST00000460573 TSPAN32Q96QS1 320 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 ULBP2Q9BZM5 246 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 ACTR6Q9GZN1 396 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 APCP25054 2843 aa19.76■□□□□ 0.75
C9orf3-209ENST00000460573 SH3D21A4FU49 640 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 H3BNX3 289 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 M0R3G1 203 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 AHCYL1O43865 530 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 TXNDC12O95881 172 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 SDHAP31040 664 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 ERVK-25P63136 954 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 LGALS3BPQ08380 585 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 HIST3H3Q16695 136 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 FAM122BQ7Z309 247 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 AMIGO2Q86SJ2 522 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 ZDHHC13Q8IUH4 622 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 C17orf78Q8N4C9 275 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 NOXO1Q8NFA2 376 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 LINC01560Q8TB33 94 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 ZNF519Q8TB69 540 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 HSD17B8Q92506 261 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 STMN2Q93045 179 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 WFIKKN1Q96NZ8 548 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 NIPSNAP1Q9BPW8 284 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 MED18Q9BUE0 208 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 ALG12Q9BV10 488 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 CRLF2Q9HC73 371 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 S100A14Q9HCY8 104 aa19.75■□□□□ 0.75
C9orf3-209ENST00000460573 G3V2T6 193 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 ARPC3O15145 178 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 IDH3BO43837 385 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 EPXP11678 715 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 ZNF23P17027 643 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 GABRA6Q16445 453 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 CEACAM16Q2WEN9 425 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 TIMM23BQ5SRD1 257 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 LINGO2Q7L985 606 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 WDFY1Q8IWB7 410 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 ATG16L2Q8NAA4 619 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 S100PBPQ96BU1 408 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 SAMD8Q96LT4 415 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 ZNF570Q96NI8 536 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 RBP7Q96R05 134 aa19.74■□□□□ 0.75
C9orf3-209ENST00000460573 KCNK17Q96T54 332 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms