RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 NPPAP01160 153 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 IGHV4-34P06331 123 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 RHOXF2BP0C7M4 288 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 ZNF24P17028 368 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 SLC26A3P40879 764 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 GPR6P46095 362 aaPredicted RBP3.73□□□□□ -1.81
CCDC50-203ENST00000460064 MRPS22P82650 360 aaKnown RBP3.73□□□□□ -1.81
CCDC50-203ENST00000460064 SRSF5Q13243 272 aaKnown RBP3.73□□□□□ -1.81
CCDC50-203ENST00000460064 GPNMBQ14956 572 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 SYCP1Q15431 976 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 LRRC10Q5BKY1 277 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 C1orf185Q5T7R7 199 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 ACP7Q6ZNF0 438 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 ASCL5Q7RTU5 278 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 SH2D6Q7Z4S9 175 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 LHFPL3Q86UP9 236 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 ZADH2Q8N4Q0 377 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 FAM71E2Q8N5Q1 922 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 ZNF557Q8N988 423 aaPredicted RBP3.73□□□□□ -1.81
CCDC50-203ENST00000460064 BBOF1Q8ND07 529 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 CCDC54Q8NEL0 328 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 SLC22A8Q8TCC7 542 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 RNF138Q8WVD3 245 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 KCTD14Q9BQ13 255 aaPredicted RBP3.73□□□□□ -1.81
CCDC50-203ENST00000460064 RHOXF2Q9BQY4 288 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 STMN4Q9H169 189 aaPredicted RBP3.73□□□□□ -1.81
CCDC50-203ENST00000460064 DEFB127Q9H1M4 99 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 FANCEQ9HB96 536 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 EML4Q9HC35 981 aaKnown RBP3.73□□□□□ -1.81
CCDC50-203ENST00000460064 CCL28Q9NRJ3 127 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 ABCB10Q9NRK6 738 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 INPP5EQ9NRR6 644 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 UBAP1Q9NZ09 502 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 XCL2Q9UBD3 114 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 CACNG2Q9Y698 323 aa3.73□□□□□ -1.81
CCDC50-203ENST00000460064 IGKV6D-41A0A0C4DH26 115 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 SMCO3A2RU48 225 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 NCF1BA6NI72 391 aaPredicted RBP3.72□□□□□ -1.81
CCDC50-203ENST00000460064 NCF1CA8MVU1 366 aaPredicted RBP3.72□□□□□ -1.81
CCDC50-203ENST00000460064 TRIM49D1C9J1S8 452 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 SLC31A2O15432 143 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 ZNF861PO60384 105 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 FGGP02679 453 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 TPM1P09493 284 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 DUX4L4P0CJ87 422 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 GALP22466 123 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 CCNE1P24864 410 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 DRD3P35462 400 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 TFPI2P48307 235 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 SUB1P53999 127 aaKnown RBP eCLIP3.72□□□□□ -1.81
CCDC50-203ENST00000460064 UGT2B15P54855 530 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 HADHBP55084 474 aaKnown RBP3.72□□□□□ -1.81
CCDC50-203ENST00000460064 PRMT2P55345 433 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 CTAG1AP78358 180 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 IDI1Q13907 227 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 HADHQ16836 314 aaKnown RBP3.72□□□□□ -1.81
CCDC50-203ENST00000460064 C2orf83Q53S99 150 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 XKR7Q5GH72 579 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 CARD17Q5XLA6 110 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 FRMPD2BQ6IN97 320 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 ZNF836Q6ZNA1 936 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 CENPQQ7L2Z9 268 aaPredicted RBP3.72□□□□□ -1.81
CCDC50-203ENST00000460064 NIPA1Q7RTP0 329 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 LINC00469Q8N7U9 141 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 LINC01555Q8NAE3 123 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 B3GNT7Q8NFL0 401 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 OR4F15Q8NGB8 312 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 GPR151Q8TDV0 419 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 SDR42E1Q8WUS8 393 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 NRBF2Q96F24 287 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 RPRD1BQ9NQG5 326 aaKnown RBP3.72□□□□□ -1.81
CCDC50-203ENST00000460064 SLC25A37Q9NYZ2 338 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 NUFIP1Q9UHK0 495 aaKnown RBP3.72□□□□□ -1.81
CCDC50-203ENST00000460064 ZNF225Q9UK10 706 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 PSME2Q9UL46 239 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 HEBP2Q9Y5Z4 205 aa3.72□□□□□ -1.81
CCDC50-203ENST00000460064 TDRD6O60522 2096 aaKnown RBP3.72□□□□□ -1.81
CCDC50-203ENST00000460064 AKNAQ7Z591 1439 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 UNC13AQ9UPW8 1703 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 A0A1B0GUA9 196 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 ERVV-1B6SEH8 477 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 LSM1O15116 133 aaKnown RBP3.71□□□□□ -1.82
CCDC50-203ENST00000460064 SPOPO43791 374 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 FGF4P08620 206 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 PABPC4LP0CB38 370 aaKnown RBP3.71□□□□□ -1.82
CCDC50-203ENST00000460064 GKN3PP0CG01 181 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 TDGF1P13385 188 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 CSNK1DP48730 415 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 TDGF1P3P51864 188 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 CDH6P55285 790 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 GPX6P59796 221 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 REG3AQ06141 175 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 CKAP4Q07065 602 aaKnown RBP3.71□□□□□ -1.82
CCDC50-203ENST00000460064 AQP6Q13520 282 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 DOC2AQ14183 400 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 FZD2Q14332 565 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 RAET1LQ5VY80 246 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 METAP1DQ6UB28 335 aaPredicted RBP3.71□□□□□ -1.82
CCDC50-203ENST00000460064 RNF175Q8N4F7 328 aa3.71□□□□□ -1.82
CCDC50-203ENST00000460064 OR10G9Q8NGN4 311 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms