RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 OR4C15Q8NGM1 316 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 FAM46AQ96IP4 442 aaKnown RBP9.41□□□□□ -0.9
UBR4-208ENST00000459947 ZNF570Q96NI8 536 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 BDH2Q9BUT1 245 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 ARMC1Q9NVT9 282 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 SIGLEC7Q9Y286 467 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 KLF4O43474 513 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 CTAG2O75638 210 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 RAD51DO75771 328 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 GPR4P46093 362 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 CENPAP49450 140 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 CEACAM16Q2WEN9 425 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 TBRG1Q3YBR2 411 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 LRRC75AQ8NAA5 344 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 OR13C2Q8NGS9 318 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 IPCEF1Q8WWN9 437 aaPredicted RBP9.41□□□□□ -0.9
UBR4-208ENST00000459947 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.41□□□□□ -0.9
UBR4-208ENST00000459947 SLC25A15Q9Y619 301 aa9.41□□□□□ -0.9
UBR4-208ENST00000459947 M0R3G1 203 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 PGA4P0DJD7 388 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 PGA3P0DJD8 388 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 FASP25445 335 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 COL8A1P27658 744 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 ARMC4Q5T2S8 1044 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 HIPK1Q86Z02 1210 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 SVOPLQ8N434 492 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 CANT1Q8WVQ1 401 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 PRRG3Q9BZD7 231 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 RNF115Q9Y4L5 304 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 LRRN3E7EW58 273 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 PTP4A3O75365 173 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 TRMUO75648 421 aaKnown RBP9.4□□□□□ -0.9
UBR4-208ENST00000459947 RENP00797 406 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 HRGP04196 525 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 SDHAP31040 664 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 ACVR1BP36896 505 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 PCBD1P61457 104 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 ARF1P84077 181 aaKnown RBP9.4□□□□□ -0.9
UBR4-208ENST00000459947 TAB1Q15750 504 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 RFX4Q33E94 735 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 NCMAPQ5T1S8 102 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 LRRC17Q8N6Y2 441 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 OR10G2Q8NGC3 310 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 OR1J2Q8NGS2 313 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 TNFRSF13CQ96RJ3 184 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 FOXB1Q99853 325 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 KLHL21Q9UJP4 597 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 KALRNO60229 2985 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 LOC400499M0QZD8 3231 aa9.4□□□□□ -0.9
UBR4-208ENST00000459947 UPK3AO75631 287 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 SERPINI2O75830 405 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 IFNGP01579 166 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 CBR1P16152 277 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 CRABP1P29762 137 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 CAMK2DQ13557 499 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 PGBD2Q6P3X8 592 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 KDM8Q8N371 416 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 OR52J3Q8NH60 311 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 MOSPD2Q8NHP6 518 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 GTPBP3Q969Y2 492 aaKnown RBP9.4□□□□□ -0.91
UBR4-208ENST00000459947 ALKBH3Q96Q83 286 aaPredicted RBP9.4□□□□□ -0.91
UBR4-208ENST00000459947 FAIMQ9NVQ4 179 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 MED29Q9NX70 200 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 CFAP47Q6ZTR5 3102 aa9.4□□□□□ -0.91
UBR4-208ENST00000459947 OR8G3PP0DMU2 310 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 PTDSS1P48651 473 aaKnown RBP9.39□□□□□ -0.91
UBR4-208ENST00000459947 SLC36A2Q495M3 483 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 SLC36A3Q495N2 470 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 ZNF813Q6ZN06 617 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 JAZF1Q86VZ6 243 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 OR4F15Q8NGB8 312 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 OR51A7Q8NH64 312 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 OR5K1Q8NHB7 308 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 ZNF519Q8TB69 540 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 LURAP1Q96LR2 239 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 MRPL13Q9BYD1 178 aaKnown RBP9.39□□□□□ -0.91
UBR4-208ENST00000459947 CLEC4MQ9H2X3 399 aaPredicted RBP9.39□□□□□ -0.91
UBR4-208ENST00000459947 NRIP3Q9NQ35 241 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 CRNNQ9UBG3 495 aaPredicted RBP9.39□□□□□ -0.91
UBR4-208ENST00000459947 SEC14L4Q9UDX3 406 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 PCNX1Q96RV3 2341 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 ICE1Q9Y2F5 2266 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 SLC22A23A1A5C7 686 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 KHDRBS3O75525 346 aaKnown RBP9.39□□□□□ -0.91
UBR4-208ENST00000459947 DIRAS1O95057 198 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 BLVRAP53004 296 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 MRPS34P82930 218 aaKnown RBP9.39□□□□□ -0.91
UBR4-208ENST00000459947 KRR1Q13601 381 aaKnown RBP9.39□□□□□ -0.91
UBR4-208ENST00000459947 ATP6AP1Q15904 470 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 HIST3H3Q16695 136 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 CARD17Q5XLA6 110 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 UNQ6126/PRO20091Q6UXV3 157 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 ZNF620Q6ZNG0 422 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 PIK3IP1Q96FE7 263 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 KATNB1Q9BVA0 655 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 OR52D1Q9H346 318 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 CRLF2Q9HC73 371 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 SPEF1Q9Y4P9 236 aa9.39□□□□□ -0.91
UBR4-208ENST00000459947 AP4S1Q9Y587 144 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms