RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 FUNDC1Q8IVP5 155 aa18.49■□□□□ 0.55
CPNE1-220ENST00000458038 OR6X1Q8NH79 312 aa18.49■□□□□ 0.55
CPNE1-220ENST00000458038 TMEM186Q96B77 213 aa18.49■□□□□ 0.55
CPNE1-220ENST00000458038 ZBTB9Q96C00 473 aa18.49■□□□□ 0.55
CPNE1-220ENST00000458038 SYT3Q9BQG1 590 aa18.49■□□□□ 0.55
CPNE1-220ENST00000458038 WNK2Q9Y3S1 2297 aa18.49■□□□□ 0.55
CPNE1-220ENST00000458038 HPXP02790 462 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 OR8G3PP0DMU2 310 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 ANPEPP15144 967 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 COL8A2P25067 703 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 ALDH3B1P43353 468 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 LINC00114Q6XXX2 140 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 RINLQ6ZS11 566 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 CLDND2Q8NHS1 167 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 C7orf26Q96N11 449 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 CCDC28BQ9BUN5 200 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 C1orf198Q9H425 327 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 OCEL1Q9H607 264 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 HIF1ANQ9NWT6 349 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 GLTPQ9NZD2 209 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 VAPAQ9P0L0 249 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 SLAMF8Q9P0V8 285 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 ANGPT4Q9Y264 503 aa18.48■□□□□ 0.55
CPNE1-220ENST00000458038 TRBV5-3A0A0A0MS03 114 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 TPST2O60704 377 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 FARS2O95363 451 aaKnown RBP18.47■□□□□ 0.55
CPNE1-220ENST00000458038 PTHP01270 115 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 MSMBP08118 114 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 VIMP08670 466 aaKnown RBP18.47■□□□□ 0.55
CPNE1-220ENST00000458038 TCN1P20061 433 aaPredicted RBP18.47■□□□□ 0.55
CPNE1-220ENST00000458038 BIDP55957 195 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 ZP4Q12836 540 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 RAB39AQ14964 217 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 C12orf54Q6X4T0 127 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 SLC22A24Q8N4F4 322 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 TMEM54Q969K7 222 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 TLCD1Q96CP7 247 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 SLC52A3Q9NQ40 469 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 CCDC167Q9P0B6 97 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 DUSP13Q9UII6 198 aa18.47■□□□□ 0.55
CPNE1-220ENST00000458038 A0A1W2PPW3 197 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 CHP2O43745 196 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 MGRN1O60291 552 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 MFN2O95140 757 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 SEC24CP53992 1094 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 PAGE3Q5JUK9 113 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 RGS7BPQ6MZT1 257 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-220ENST00000458038 SLC35D2Q76EJ3 337 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 LRP11Q86VZ4 500 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 SKA3Q8IX90 412 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 C10orf111Q8N326 155 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 OR51F2Q8NH61 342 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 SLC25A44Q96H78 314 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-220ENST00000458038 MCHR1Q99705 422 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 METTL17Q9H7H0 456 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-220ENST00000458038 ZNF275Q9NSD4 429 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-220ENST00000458038 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-220ENST00000458038 DYSFO75923 2080 aa18.46■□□□□ 0.55
CPNE1-220ENST00000458038 TRAV20A0A0B4J274 112 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 C11orf98E9PRG8 122 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 PPIHO43447 177 aaKnown RBP18.45■□□□□ 0.54
CPNE1-220ENST00000458038 SERPINI2O75830 405 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 RBBP4Q09028 425 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 MOGQ16653 247 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 NKPD1Q17RQ9 610 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 PCGF3Q3KNV8 242 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 TMEM53Q6P2H8 277 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 SHQ1Q6PI26 577 aaKnown RBP18.45■□□□□ 0.54
CPNE1-220ENST00000458038 C11orf65Q8NCR3 313 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 ZNF418Q8TF45 676 aaPredicted RBP18.45■□□□□ 0.54
CPNE1-220ENST00000458038 ZNF566Q969W8 418 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 NANSQ9NR45 359 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 SLCO1C1Q9NYB5 712 aa18.45■□□□□ 0.54
CPNE1-220ENST00000458038 LRRN3E7EW58 273 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 HIST1H2ABP04908 130 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 GAAP10253 952 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 ZNF250P15622 560 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 AQP1P29972 269 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 IDH3AP50213 366 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 ATP4BP51164 291 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 LMO4P61968 165 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 MYBPC1Q00872 1141 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 TEKQ02763 1124 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 MAD2L1BPQ15013 274 aaPredicted RBP18.44■□□□□ 0.54
CPNE1-220ENST00000458038 NRN1LQ496H8 165 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 TMEM154Q6P9G4 183 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 HIST3H2AQ7L7L0 130 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 ZNF584Q8IVC4 421 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 WDFY1Q8IWB7 410 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 SLC30A7Q8NEW0 376 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 OR1J2Q8NGS2 313 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 SNX33Q8WV41 574 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 HIST1H2ACQ93077 130 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 YIPF5Q969M3 257 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 LRRC37BQ96QE4 947 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 ARHGDIGQ99819 225 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 SLC19A3Q9BZV2 496 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 LRMDAQ9H2I8 198 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 RABEP2Q9H5N1 569 aa18.44■□□□□ 0.54
CPNE1-220ENST00000458038 IKZF5Q9H5V7 419 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms