RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SLC30A7Q8NEW0 376 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 ABHD16AO95870 558 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 SCG5P05408 212 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 SF3B4Q15427 424 aaKnown RBP eCLIP18.13■□□□□ 0.49
SNX27-204ENST00000458013 SLC46A3Q7Z3Q1 461 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 PXT1Q8NFP0 134 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 OR56B1Q8NGI3 324 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 OR2T27Q8NH04 317 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 OR14A16Q8NHC5 309 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 KCNJ15Q99712 375 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 PSORS1C1Q9UIG5 152 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 ZNF749O43361 778 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 KCNK5O95279 499 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 NFYAP23511 347 aaPredicted RBP18.13■□□□□ 0.49
SNX27-204ENST00000458013 ALKBH1Q13686 389 aaKnown RBP18.13■□□□□ 0.49
SNX27-204ENST00000458013 TBCEQ15813 527 aaPredicted RBP18.13■□□□□ 0.49
SNX27-204ENST00000458013 PRTGQ2VWP7 1150 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 GLIPR1L1Q6UWM5 242 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 ZNF454Q8N9F8 522 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 SIAEQ9HAT2 523 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 EMC7Q9NPA0 242 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 ATP13A2Q9NQ11 1180 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 A0A1B0GWA3 101 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 NME2P1O60361 137 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 DDAH2O95865 285 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 DPP4P27487 766 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 GLYR1Q49A26 553 aaPredicted RBP18.13■□□□□ 0.49
SNX27-204ENST00000458013 CNTN4Q8IWV2 1026 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 WFDC5Q8TCV5 224 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 SLC35B4Q969S0 331 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 LTB4R2Q9NPC1 389 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 SERTM2A0A1B0GWG4 89 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 H0Y8X5 98 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 RD3LP0DJH9 198 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 CHRNB4P30926 498 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 UBE2MP61081 183 aaKnown RBP18.13■□□□□ 0.49
SNX27-204ENST00000458013 PLK5Q496M5 336 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 CMPK2Q5EBM0 449 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 PAQR9Q6ZVX9 377 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 UBAC2Q8NBM4 344 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 OR11L1Q8NGX0 322 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 TXN2Q99757 166 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 ADAM19Q9H013 955 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 CHST8Q9H2A9 424 aa18.13■□□□□ 0.49
SNX27-204ENST00000458013 SEMG1P04279 462 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 RACK1P63244 317 aaKnown RBP18.12■□□□□ 0.49
SNX27-204ENST00000458013 LACC1Q8IV20 430 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 SIRT6Q8N6T7 355 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 PLPP5Q8NEB5 264 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 MITD1Q8WV92 249 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 LRFN5Q96NI6 719 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 DEFB127Q9H1M4 99 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 TMEM231Q9H6L2 316 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 TAS2R4Q9NYW5 299 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 RAB40ALP0C0E4 278 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 GABRA4P48169 554 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 MRPS10P82664 201 aaKnown RBP18.12■□□□□ 0.49
SNX27-204ENST00000458013 OR51H1Q8NH63 302 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 LILRB4Q8NHJ6 448 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 RAB40AQ8WXH6 277 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 GAREM1Q9H706 876 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 GDE1Q9NZC3 331 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 GABREP78334 506 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 ASTLQ6HA08 431 aaPredicted RBP18.12■□□□□ 0.49
SNX27-204ENST00000458013 OR1S2Q8NGQ3 325 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 PTDSS2Q9BVG9 487 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 MFRPQ9BY79 579 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 MBNL1Q9NR56 388 aaKnown RBP18.12■□□□□ 0.49
SNX27-204ENST00000458013 HCRTR1O43613 425 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 MFAP5Q13361 173 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 SLC14A2Q15849 920 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 OR10K2Q6IF99 312 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 TVP23CQ96ET8 276 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 RNF212BA8MTL3 300 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 TRAF3IP2O43734 574 aaPredicted RBP18.12■□□□□ 0.49
SNX27-204ENST00000458013 MRPS14O60783 128 aaKnown RBP18.12■□□□□ 0.49
SNX27-204ENST00000458013 SNCAP37840 140 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 KIAA1024LP59773 190 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 ACSM1Q08AH1 577 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 ARL16Q0P5N6 197 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 ZNF718Q3SXZ3 478 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 STEAP1BQ6NZ63 245 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 REEP6Q96HR9 211 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 AMDHD1Q96NU7 426 aa18.12■□□□□ 0.49
SNX27-204ENST00000458013 CHD2O14647 1828 aaKnown RBP18.11■□□□□ 0.49
SNX27-204ENST00000458013 FAM221AA4D161 298 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 ZNF93P35789 620 aaPredicted RBP18.11■□□□□ 0.49
SNX27-204ENST00000458013 SLC22A25Q6T423 547 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 FAM71CQ8NEG0 241 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 BPIFCQ8NFQ6 507 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 OR10R2Q8NGX6 335 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 UPRTQ96BW1 309 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 UFSP2Q9NUQ7 469 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 MYH4Q9Y623 1939 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 ACOXLQ9NUZ1 547 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 TRAV36DV7A0A075B6V5 113 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 A0A0B4J203 849 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 CLDN24A6NM45 220 aa18.11■□□□□ 0.49
SNX27-204ENST00000458013 FOXE1O00358 373 aaPredicted RBP18.11■□□□□ 0.49
SNX27-204ENST00000458013 PIPP12273 146 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms