RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ZNF346Q9UL40 294 aaKnown RBP8.84□□□□□ -0.99
ATG4A-206ENST00000457035 SAMHD1Q9Y3Z3 626 aaKnown RBP8.84□□□□□ -0.99
ATG4A-206ENST00000457035 U3KQV3 271 aa8.84□□□□□ -0.99
ATG4A-206ENST00000457035 FBN2P35556 2912 aa8.84□□□□□ -0.99
ATG4A-206ENST00000457035 ARID1AO14497 2285 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 A0A1W2PRG6 482 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 UNC119BA6NIH7 251 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 MCIDASD6RGH6 385 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 AKAP8O43823 692 aaKnown RBP8.83□□□□□ -1
ATG4A-206ENST00000457035 TIPRLO75663 272 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 CIB2O75838 187 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 CCNB2O95067 398 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 IGHMP01871 453 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 FPR3P25089 353 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 IFNGR2P38484 337 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 ACTR3P61158 418 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 TSPAN31Q12999 210 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 GK3PQ14409 553 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 MELKQ14680 651 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 TAF11Q15544 211 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 GABRA6Q16445 453 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 HIST3H3Q16695 136 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 C9orf135Q5VTT2 229 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 CARD17Q5XLA6 110 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 LRFN4Q6PJG9 635 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 IGFN1Q86VF2 1251 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 OR9Q2Q8NGE9 314 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 GNPDA2Q8TDQ7 276 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 ASB10Q8WXI3 467 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 TMEM54Q969K7 222 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 SLC25A44Q96H78 314 aaPredicted RBP8.83□□□□□ -1
ATG4A-206ENST00000457035 RSRC1Q96IZ7 334 aaKnown RBP8.83□□□□□ -1
ATG4A-206ENST00000457035 YY1AP1Q9H869 796 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 CRLF2Q9HC73 371 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 GPR35Q9HC97 309 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 KRCC1Q9NPI7 259 aaPredicted RBP8.83□□□□□ -1
ATG4A-206ENST00000457035 DNAJB9Q9UBS3 223 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 AP4S1Q9Y587 144 aa8.83□□□□□ -1
ATG4A-206ENST00000457035 CIB4A0PJX0 185 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 CENPBD1B2RD01 187 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 ZNF587BE7ETH6 402 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 M0R3G1 203 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 GNGT2O14610 69 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 TRMUO75648 421 aaKnown RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 RAD51DO75771 328 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 KRT33AO76009 404 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 NDUFB2O95178 105 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 CD14P08571 375 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 PGA4P0DJD7 388 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 PGA3P0DJD8 388 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 ACADSP16219 412 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 CRYGSP22914 178 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 IL32P24001 234 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 RPL27P61353 136 aaKnown RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 ERVK-25P63136 954 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 ROR2Q01974 943 aaKnown RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 TGFBR3Q03167 851 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 KPNB1Q14974 876 aaKnown RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 TAB1Q15750 504 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 RFX4Q33E94 735 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 TIMM23BQ5SRD1 257 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 OR7E24Q6IFN5 339 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 HMBOX1Q6NT76 420 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 FAM122BQ7Z309 247 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 ABHD12BQ7Z5M8 362 aaPredicted RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 P2RY8Q86VZ1 359 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 GPR137CQ8N3F9 429 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 ARIH2OSQ8N7S6 290 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 WDR31Q8NA23 367 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 C1orf162Q8NEQ5 155 aaPredicted RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 GIPC3Q8TF64 312 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 HSD17B8Q92506 261 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 HDAC2Q92769 488 aaKnown RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 BCL2L2Q92843 193 aaPredicted RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 ZNF566Q969W8 418 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 NMD3Q96D46 503 aaKnown RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 C14orf79Q96F83 325 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 ZC3HAV1LQ96H79 300 aaKnown RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 ALKBH3Q96Q83 286 aaPredicted RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 GPX7Q96SL4 187 aaPredicted RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 MED18Q9BUE0 208 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 DGCR6LQ9BY27 220 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 DENND2DQ9H6A0 471 aaPredicted RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 NRIP3Q9NQ35 241 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 GLTPQ9NZD2 209 aa8.82□□□□□ -1
ATG4A-206ENST00000457035 TEP1Q99973 2627 aaKnown RBP8.82□□□□□ -1
ATG4A-206ENST00000457035 OR5H1A6NKK0 313 aa8.81□□□□□ -1
ATG4A-206ENST00000457035 A6NNC1 897 aa8.81□□□□□ -1
ATG4A-206ENST00000457035 DEFB108AA8MXU0 73 aa8.81□□□□□ -1
ATG4A-206ENST00000457035 CASKO14936 926 aa8.81□□□□□ -1
ATG4A-206ENST00000457035 DEAF1O75398 565 aaPredicted RBP8.81□□□□□ -1
ATG4A-206ENST00000457035 CTAG2O75638 210 aa8.81□□□□□ -1
ATG4A-206ENST00000457035 IGHG1P01857 330 aa8.81□□□□□ -1
ATG4A-206ENST00000457035 TP53P04637 393 aaPredicted RBP8.81□□□□□ -1
ATG4A-206ENST00000457035 CDH2P19022 906 aaPredicted RBP8.81□□□□□ -1
ATG4A-206ENST00000457035 PRKACGP22612 351 aa8.81□□□□□ -1
ATG4A-206ENST00000457035 RPL4P36578 427 aaKnown RBP8.81□□□□□ -1
ATG4A-206ENST00000457035 CSNK1A1P48729 337 aa8.81□□□□□ -1
ATG4A-206ENST00000457035 DAP3P51398 398 aaKnown RBP8.81□□□□□ -1
ATG4A-206ENST00000457035 ZNF133P52736 654 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms