RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 QDPRP09417 244 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 CBR1P16152 277 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 ACADSP16219 412 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 ARR3P36575 388 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 ZNF84P51523 738 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 ATP5J2P56134 94 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 SMIM11AP58511 58 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 NPRL3Q12980 569 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 TAF11Q15544 211 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 TBPL2Q6SJ96 375 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 MEX3DQ86XN8 651 aaKnown RBP15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 GSX2Q9BZM3 304 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 NDEL1Q9GZM8 345 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 KRCC1Q9NPI7 259 aaPredicted RBP15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 MAN2C1Q9NTJ4 1040 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 FAM53CQ9NYF3 392 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 NDUFAF4Q9P032 175 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 TMEM5Q9Y2B1 443 aa15.77■□□□□ 0.12
PDLIM2-215ENST00000456545 DIRAS1O95057 198 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 FARS2O95363 451 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 STAMBPO95630 424 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 DANCRP0C864 163 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 B4GALT1P15291 398 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 MAKP20794 623 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 RPL4P36578 427 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 SLC9A3P48764 834 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 IDH3GP51553 393 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 CTXN1P60606 82 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 LSM11P83369 360 aaKnown RBP eCLIP15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 PIGFQ07326 219 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 TOP3AQ13472 1001 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 PGGHGQ32M88 737 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 ANKDD1AQ495B1 522 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 PIWIL3Q7Z3Z3 882 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 YTHDF3Q7Z739 585 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 WDFY1Q8IWB7 410 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 SYT14Q8NB59 555 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 WFDC11Q8NEX6 87 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 ASB10Q8WXI3 467 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 TNFRSF13CQ96RJ3 184 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 NELFAQ9H3P2 528 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 AURKCQ9UQB9 309 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 HIF3AQ9Y2N7 669 aa15.76■□□□□ 0.11
PDLIM2-215ENST00000456545 TRAV27A0A087WT01 109 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 VSTM5A8MXK1 200 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 ATP6V1G2-DDX39BF2Z307 99 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 DHHO43323 396 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 TRMUO75648 421 aaKnown RBP15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 PRSS23O95084 383 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 PGA4P0DJD7 388 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 PGA3P0DJD8 388 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 BMP4P12644 408 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 FUT4P22083 530 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 TTKP33981 857 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 CDKN1AP38936 164 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 GPR4P46093 362 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 MYBPC1Q00872 1141 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 GSG1Q2KHT4 349 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 C3orf36Q3SXR2 165 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 ZNF544Q6NX49 715 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 PODNL1Q6PEZ8 512 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 RINLQ6ZS11 566 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 MDP1Q86V88 176 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 ARHGAP24Q8N264 748 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 MUC15Q8N387 334 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 FAM86B1Q8N7N1 296 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 FAM169BQ8N8A8 192 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 OR52J3Q8NH60 311 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 MCHR2Q969V1 340 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 C7orf34Q96L11 122 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 KATNB1Q9BVA0 655 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 TXNIPQ9H3M7 391 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 ROS1P08922 2347 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 ALPK2Q86TB3 2170 aa15.75■□□□□ 0.11
PDLIM2-215ENST00000456545 CADP27708 2225 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 A0A1W2PRQ8 180 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 CENPBD1B2RD01 187 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 GADD45GO95257 159 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 RAB36O95755 333 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 HLA-HP01893 362 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 FABP3P05413 133 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 CECR9P0C854 216 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 OR8G3PP0DMU2 310 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 NR2C1P13056 603 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 APOBEC3AP31941 199 aaPredicted RBP15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 ACVR1BP36896 505 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 VLDLRP98155 873 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 SPIBQ01892 262 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 NAAAQ02083 359 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 CHRNB3Q05901 458 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 CD47Q08722 323 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 DGCR6Q14129 220 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 FXNQ16595 210 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 LRFN4Q6PJG9 635 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 PRSS57Q6UWY2 283 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 CYP2R1Q6VVX0 501 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 TMPRSS11FQ6ZWK6 438 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 TSEN54Q7Z6J9 526 aaKnown RBP15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 IGFN1Q86VF2 1251 aa15.74■□□□□ 0.11
PDLIM2-215ENST00000456545 NOXO1Q8NFA2 376 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms