RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 A0A1W2PRG6 482 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 BCL10O95999 233 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 H1F0P07305 194 aaKnown RBP15.13■□□□□ 0.01
USP39-208ENST00000455732 DANCRP0C864 163 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 PGA4P0DJD7 388 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 PGA3P0DJD8 388 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 FOSL1P15407 271 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 MAKP20794 623 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 MSX2P35548 267 aaPredicted RBP15.13■□□□□ 0.01
USP39-208ENST00000455732 AQP2P41181 271 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 SLC9A3P48764 834 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 DAP3P51398 398 aaKnown RBP15.13■□□□□ 0.01
USP39-208ENST00000455732 CDH11P55287 796 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 PRSS57Q6UWY2 283 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 TMEM171Q8WVE6 324 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 ASB10Q8WXI3 467 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 PERPQ96FX8 193 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 C1orf21Q9H246 121 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 MUC13Q9H3R2 512 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 INIPQ9NRY2 104 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 ZNF701Q9NV72 531 aaPredicted RBP15.13■□□□□ 0.01
USP39-208ENST00000455732 GLTPQ9NZD2 209 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 ACTR3BQ9P1U1 418 aa15.13■□□□□ 0.01
USP39-208ENST00000455732 STX18Q9P2W9 335 aaKnown RBP15.13■□□□□ 0.01
USP39-208ENST00000455732 PRPF19Q9UMS4 504 aaKnown RBP15.13■□□□□ 0.01
USP39-208ENST00000455732 IGKV3-15P01624 115 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 IGLV1-44P01699 117 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 IGHG1P01857 330 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 F13BP05160 661 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 PTH2RP49190 550 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 SPOCK1Q08629 439 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 MELKQ14680 651 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 TAF11Q15544 211 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 HIST3H3Q16695 136 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 ALG10Q5BKT4 473 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 MTX3Q5HYI7 312 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 RINLQ6ZS11 566 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 TMPRSS11FQ6ZWK6 438 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 TRPM8Q7Z2W7 1104 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 MOSPD2Q8NHP6 518 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 SLC38A2Q96QD8 506 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 C1QTNF6Q9BXI9 259 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 MRPL13Q9BYD1 178 aaKnown RBP15.12■□□□□ 0.01
USP39-208ENST00000455732 LAMP3Q9UQV4 416 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 TMEM5Q9Y2B1 443 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 TLN2Q9Y4G6 2542 aa15.12■□□□□ 0.01
USP39-208ENST00000455732 IGHV1-18A0A0C4DH31 117 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 EFCAB9A8MZ26 197 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 MCIDASD6RGH6 385 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 hCG_2039718K7EN88 272 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 OVOL3O00110 214 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 IGHMP01871 453 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 SOD3P08294 240 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 SAGP10523 405 aaPredicted RBP15.11■□□□□ 0.01
USP39-208ENST00000455732 FHL1Q13642 323 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 PGGHGQ32M88 737 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 ARMC4Q5T2S8 1044 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 PODNL1Q6PEZ8 512 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 TBPL2Q6SJ96 375 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 SLC22A25Q6T423 547 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 CDK20Q8IZL9 346 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 DEPDC4Q8N2C3 294 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 PIAS4Q8N2W9 510 aaPredicted RBP15.11■□□□□ 0.01
USP39-208ENST00000455732 NOXO1Q8NFA2 376 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 SMAP2Q8WU79 429 aaPredicted RBP15.11■□□□□ 0.01
USP39-208ENST00000455732 MCUR1Q96AQ8 359 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 FOXB1Q99853 325 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 FUZQ9BT04 418 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 KATNB1Q9BVA0 655 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 GRIP2Q9C0E4 1043 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 CXorf56Q9H5V9 222 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 IL1RAPQ9NPH3 570 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 CISD1Q9NZ45 108 aaKnown RBP15.11■□□□□ 0.01
USP39-208ENST00000455732 POFUT2Q9Y2G5 429 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 V9GYQ6 96 aa15.11■□□□□ 0.01
USP39-208ENST00000455732 NSD1Q96L73 2696 aaPredicted RBP15.11■□□□□ 0.01
USP39-208ENST00000455732 NAV3Q8IVL0 2385 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 CBR1P16152 277 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 ATP6V1B2P21281 511 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 ZNF133P52736 654 aaPredicted RBP15.1■□□□□ 0.01
USP39-208ENST00000455732 SMIM11AP58511 58 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 RUNX1T1Q06455 604 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 LAPTM4AQ15012 233 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 FGD3Q5JSP0 725 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 LCN8Q6JVE9 175 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 LRFN4Q6PJG9 635 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 ZNF813Q6ZN06 617 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 RRM2BQ7LG56 351 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 YTHDF3Q7Z739 585 aaKnown RBP15.1■□□□□ 0.01
USP39-208ENST00000455732 OAFQ86UD1 273 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 DTX2Q86UW9 622 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 LRRC75AQ8NAA5 344 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 C18orf12Q96KH6 178 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 TXNIPQ9H3M7 391 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 FAIMQ9NVQ4 179 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 TAS2R1Q9NYW7 299 aa15.1■□□□□ 0.01
USP39-208ENST00000455732 TRBV4-1A0A0J9YWV2 114 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 ZNF503-AS2A6NEH8 195 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 CDC42EP2O14613 210 aa15.09■□□□□ 0.01
USP39-208ENST00000455732 ENTPD5O75356 428 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms