RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 EIF2B2P49770 351 aaKnown RBP12.32□□□□□ -0.44
CLK3-203ENST00000454830 SLC25A1P53007 311 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 IL10RAQ13651 578 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 SF3A2Q15428 464 aaKnown RBP12.32□□□□□ -0.44
CLK3-203ENST00000454830 ISXQ2M1V0 245 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 EMC4Q5J8M3 183 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 KRT77Q7Z794 578 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 ENKURQ8TC29 256 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 ZFP3Q96NJ6 502 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 STRADBQ9C0K7 418 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 TXNIPQ9H3M7 391 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 SACM1LQ9NTJ5 587 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 POLR1DQ9Y2S0 133 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 LNP1A1A4G5 178 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 NTN3O00634 580 aaPredicted RBP12.31□□□□□ -0.44
CLK3-203ENST00000454830 PLPP3O14495 311 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 SNRPBP14678 240 aaKnown RBP12.31□□□□□ -0.44
CLK3-203ENST00000454830 APOBEC1P41238 236 aaKnown RBP12.31□□□□□ -0.44
CLK3-203ENST00000454830 CAPZA2P47755 286 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 FMODQ06828 376 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 GGTLC2Q14390 218 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 TMEM176BQ3YBM2 270 aaPredicted RBP12.31□□□□□ -0.44
CLK3-203ENST00000454830 HBMQ6B0K9 141 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 TMEM225Q6GV28 225 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 PAMR1Q6UXH9 720 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 ASB18Q6ZVZ8 466 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 RAB11FIP2Q7L804 512 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 B3GAT2Q9NPZ5 323 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 CENPMQ9NSP4 180 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 COA3Q9Y2R0 106 aaPredicted RBP12.31□□□□□ -0.44
CLK3-203ENST00000454830 HRH3Q9Y5N1 445 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 A0A087WV48 116 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 PMS2P1A4D2B8 440 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 PRR32B1ATL7 298 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 CTLA4P16410 223 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 ELK1P19419 428 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 MC2RQ01718 297 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.31□□□□□ -0.446e-8■□□□□ 8.3
CLK3-203ENST00000454830 HES5Q5TA89 166 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 NR2C2APQ86WQ0 139 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 OR5AK2Q8NH90 309 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 STK35Q8TDR2 534 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 TSEN15Q8WW01 171 aaKnown RBP12.31□□□□□ -0.44
CLK3-203ENST00000454830 LIPHQ8WWY8 451 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 HGDQ93099 445 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 DDOQ99489 341 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 SP140LQ9H930 580 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 B9D1Q9UPM9 204 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 ZNF879B4DU55 563 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 CASP3P42574 277 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 OC90Q02509 493 aaPredicted RBP12.31□□□□□ -0.44
CLK3-203ENST00000454830 PCOLCEQ15113 449 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 RAET1LQ5VY80 246 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 OR7E24Q6IFN5 339 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 FAM198BQ6UWH4 519 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 H1FNTQ75WM6 255 aaPredicted RBP12.31□□□□□ -0.44
CLK3-203ENST00000454830 NEDD4LQ96PU5 975 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 WACQ9BTA9 647 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 SEC61A2Q9H9S3 476 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 ELOVL3Q9HB03 270 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 TCF7L1Q9HCS4 588 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 HPF1Q9NWY4 346 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 HS3ST3B1Q9Y662 390 aa12.31□□□□□ -0.44
CLK3-203ENST00000454830 ZFPL1O95159 310 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 MPZL1O95297 269 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 TPTEP56180 551 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 NANOS3P60323 173 aaKnown RBP12.3□□□□□ -0.44
CLK3-203ENST00000454830 HSF2Q03933 536 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 ZFP36L1Q07352 338 aaKnown RBP12.3□□□□□ -0.44
CLK3-203ENST00000454830 RSBN1Q5VWQ0 802 aaPredicted RBP12.3□□□□□ -0.44
CLK3-203ENST00000454830 RPS19BP1Q86WX3 136 aaKnown RBP12.3□□□□□ -0.44
CLK3-203ENST00000454830 BMPERQ8N8U9 685 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 WDFY2Q96P53 400 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 COMMD4Q9H0A8 199 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 MMP28Q9H239 520 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 ZNF281Q9Y2X9 895 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 UGT2A1Q9Y4X1 527 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 TMEM14AQ9Y6G1 99 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 UMODP07911 640 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 CLDN12P56749 244 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 EEF1A1P5Q5VTE0 462 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 KRT74Q7RTS7 529 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 LINC00346Q8IVM7 164 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 TXNDC15Q96J42 360 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 SLITRK2Q9H156 845 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 CPNE5Q9HCH3 593 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 MRM2Q9UI43 246 aaKnown RBP12.3□□□□□ -0.44
CLK3-203ENST00000454830 RIF1Q5UIP0 2472 aaKnown RBP12.3□□□□□ -0.44
CLK3-203ENST00000454830 CSF3P09919 207 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 NAGAP17050 411 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 BIDP55957 195 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 EIF2B1Q14232 305 aaKnown RBP12.3□□□□□ -0.44
CLK3-203ENST00000454830 OPN5Q6U736 354 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 GDPD1Q8N9F7 314 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 OR2Y1Q8NGV0 311 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 GNRHR2Q96P88 292 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 AMELYQ99218 206 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 WDR54Q9H977 334 aa12.3□□□□□ -0.44
CLK3-203ENST00000454830 SLCO1C1Q9NYB5 712 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms