RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 WFDC8Q8IUA0 241 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 WDR31Q8NA23 367 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 OR9Q2Q8NGE9 314 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 MUCL1Q96DR8 90 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 SLC17A5Q9NRA2 495 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 STX18Q9P2W9 335 aaKnown RBP24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 APCP25054 2843 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 ITPR2Q14571 2701 aa24.55■■□□□ 1.52
SMARCC1-203ENST00000454240 CIB2O75838 187 aa24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 NDUFB2O95178 105 aa24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 CD14P08571 375 aa24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 TSPAN31Q12999 210 aa24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 PPA1Q15181 289 aa24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 C1QTNF12Q5T7M4 302 aa24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 BCL2L2Q92843 193 aaPredicted RBP24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 DUS3LQ96G46 650 aaKnown RBP24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 TSPAN32Q96QS1 320 aa24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 GPX7Q96SL4 187 aaPredicted RBP24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 ULBP2Q9BZM5 246 aa24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 SLC25A15Q9Y619 301 aa24.54■■□□□ 1.52
SMARCC1-203ENST00000454240 ABCA4P78363 2273 aa24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 RPL4P36578 427 aaKnown RBP24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 ARF1P84077 181 aaKnown RBP24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 ANKRD16Q6P6B7 361 aa24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 LRFN4Q6PJG9 635 aa24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 THSD4Q6ZMP0 1018 aa24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 YTHDF3Q7Z739 585 aaKnown RBP24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 OR52N5Q8NH56 324 aa24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 ZNF519Q8TB69 540 aa24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 MAGEE2Q8TD90 523 aaPredicted RBP24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 KATNB1Q9BVA0 655 aa24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 NDEL1Q9GZM8 345 aa24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 NELFAQ9H3P2 528 aa24.53■■□□□ 1.52
SMARCC1-203ENST00000454240 ZNF99A8MXY4 864 aaPredicted RBP24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 GNGT2O14610 69 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 GASTP01350 101 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 LOXP28300 417 aaPredicted RBP24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 CLRN1P58418 232 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 KRTAP10-9P60411 292 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 ERVK-25P63136 954 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 TOP3AQ13472 1001 aaPredicted RBP24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 HIKESHIQ53FT3 197 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 BEX5Q5H9J7 111 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 FAM205BPQ63HN1 556 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 SMARCD3Q6STE5 483 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 FAM122BQ7Z309 247 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 TMEM200AQ86VY9 491 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 NOXO1Q8NFA2 376 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 HDAC2Q92769 488 aaKnown RBP24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 POLDIP3Q9BY77 421 aaKnown RBP24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 NRIP3Q9NQ35 241 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 DNAJB9Q9UBS3 223 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 AMDHD2Q9Y303 409 aa24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 HRNRQ86YZ3 2850 aaPredicted RBP24.52■■□□□ 1.52
SMARCC1-203ENST00000454240 ACVR1BP36896 505 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 ZNF133P52736 654 aaPredicted RBP24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 IST1P53990 364 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 TBRG1Q3YBR2 411 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 ALKBH2Q6NS38 261 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 ZNF627Q7L945 461 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 TMEM179BQ7Z7N9 219 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 ARIH2OSQ8N7S6 290 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 SYT14Q8NB59 555 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 KCNK17Q96T54 332 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 CLEC4MQ9H2X3 399 aaPredicted RBP24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 NGBQ9NPG2 151 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 ARMC1Q9NVT9 282 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 ADAM18Q9Y3Q7 739 aa24.51■■□□□ 1.51
SMARCC1-203ENST00000454240 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 A0A1W2PR80 420 aa24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 QDPRP09417 244 aa24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 HOXB1P14653 301 aaPredicted RBP24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 RFX4Q33E94 735 aa24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 DPY19L2P2Q6ZN68 376 aa24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 AQP11Q8NBQ7 271 aa24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 MCHR2Q969V1 340 aa24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 NMD3Q96D46 503 aaKnown RBP24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 PIK3IP1Q96FE7 263 aa24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 DGCR6LQ9BY27 220 aa24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 OR52D1Q9H346 318 aa24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 OBP2BQ9NPH6 170 aa24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 IL20RAQ9UHF4 553 aa24.5■■□□□ 1.51
SMARCC1-203ENST00000454240 A6NIZ1 184 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 TIPRLO75663 272 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 HOXC12P31275 282 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 RAP1BP61224 184 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 RAP1AP62834 184 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 OR10G2Q8NGC3 310 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 FANK1Q8TC84 345 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 GIPC3Q8TF64 312 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 PLPPR2Q96GM1 343 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 Q96M85 177 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 ALG12Q9BV10 488 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 NPAP1Q9NZP6 1156 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 GRHPRQ9UBQ7 328 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 MGAT4BQ9UQ53 548 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 POFUT2Q9Y2G5 429 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 ABCA12Q86UK0 2595 aa24.49■■□□□ 1.51
SMARCC1-203ENST00000454240 A0A096LPE4 126 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 ARPC4-TTLL3A0A0A6YYG9 625 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms