RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	LMO7DN	F2Z398	122 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	CDC40	O60508	579 aa	Known RBP eCLIP	15.33	■□□□□ 0.04	6e-7	■■■■■ 30.9
TOM1-210	ENST00000449058	PRAF2	O60831	178 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	TPPP	O94811	219 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	TGM6	O95932	706 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	CSRP1	P21291	193 aa	Known RBP	15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	CDK2	P24941	298 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	CXCR1	P25024	350 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	EPHA4	P54764	986 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	PER3	P56645	1201 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	ZP1	P60852	638 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	CAMK2D	Q13557	499 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	C14orf28	Q4W4Y0	310 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	DNM1P46	Q6ZS02	220 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	C9orf40	Q8IXQ3	194 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	C1orf216	Q8TAB5	229 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	NRSN2	Q9GZP1	204 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	DLL4	Q9NR61	685 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	ELF5	Q9UKW6	265 aa	Predicted RBP	15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	FLVCR2	Q9UPI3	526 aa		15.33	■□□□□ 0.04
TOM1-210	ENST00000449058	TRAV8-7	A0A075B6U6	113 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	ALG1L2	C9J202	215 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	PHYH	O14832	338 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	T	O15178	435 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	EIF4E2	O60573	245 aa	Known RBP	15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	LDOC1	O95751	146 aa	Predicted RBP	15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	IL12B	P29460	328 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	ZBTB37	Q5TC79	503 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	C1QL3	Q5VWW1	255 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	MARCH3	Q86UD3	253 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	PM20D2	Q8IYS1	436 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	PRSS35	Q8N3Z0	413 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	OR10AC1	Q8NH08	325 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	IRF2BPL	Q9H1B7	796 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	NKIRAS2	Q9NYR9	191 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	DHCR7	Q9UBM7	475 aa	Known RBP	15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	FKBP7	Q9Y680	259 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	CPAMD8	Q8IZJ3	1885 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	C17orf51	A8MQB3	221 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	SSNA1	O43805	119 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	TPO	P07202	933 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	RPS27	P42677	84 aa	Known RBP	15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	SCAND1	P57086	179 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	FDX2	Q6P4F2	183 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	ZNF676	Q8N7Q3	588 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	DNAAF1	Q8NEP3	725 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	OTOS	Q8NHW6	89 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	CEP76	Q8TAP6	659 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	ZNF417	Q8TAU3	575 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	GPR148	Q8TDV2	347 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	C15orf40	Q8WUR7	153 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	AMELY	Q99218	206 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	PTDSS2	Q9BVG9	487 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	COMMD4	Q9H0A8	199 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058	BEX1	Q9HBH7	125 aa		15.32	■□□□□ 0.04
TOM1-210	ENST00000449058		A0A1B0GUH1	482 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	CDC14C	A4D256	554 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	ACOT7	O00154	380 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	NDUFB5	O43674	189 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	GMFG	O60234	142 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	KHDRBS3	O75525	346 aa	Known RBP	15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	WISP1	O95388	367 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	GPANK1	O95872	356 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	KIR3DL2	P43630	455 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	TAS2R20	P59543	309 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	ZP2	Q05996	745 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	RASGEF1B	Q0VAM2	473 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	TMPRSS12	Q86WS5	348 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	THEM6	Q8WUY1	208 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	MCHR2	Q969V1	340 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	DACT3	Q96B18	629 aa	Predicted RBP	15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	C4orf45	Q96LM5	186 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	HEXA-AS1	Q9H8Q6	139 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	SCP2D1	Q9UJQ7	156 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	FBXL3	Q9UKT7	428 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	RHPN2P1	A8MT19	583 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	TSC22D2	O75157	780 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	CFP	P27918	469 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	ITPKB	P27987	946 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	VEGFC	P49767	419 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	NR0B1	P51843	470 aa	Known RBP	15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	HSD11B2	P80365	405 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	MAMDC2	Q7Z304	686 aa	Predicted RBP	15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	SDR16C5	Q8N3Y7	309 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	OR8H1	Q8NGG4	311 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	OR51A4	Q8NGJ6	313 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	TTC9	Q92623	222 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	TMEM106A	Q96A25	262 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	DCBLD2	Q96PD2	775 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	WWTR1	Q9GZV5	400 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	B3GNT2	Q9NY97	397 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	KCNG2	Q9UJ96	466 aa		15.31	■□□□□ 0.04
TOM1-210	ENST00000449058	ANXA2P2	A6NMY6	339 aa		15.3	■□□□□ 0.04
TOM1-210	ENST00000449058	GLS	O94925	669 aa	Predicted RBP	15.3	■□□□□ 0.04
TOM1-210	ENST00000449058	MT-ATP6	P00846	226 aa		15.3	■□□□□ 0.04
TOM1-210	ENST00000449058	ANXA2	P07355	339 aa	Known RBP	15.3	■□□□□ 0.04
TOM1-210	ENST00000449058	PTHLH	P12272	177 aa		15.3	■□□□□ 0.04
TOM1-210	ENST00000449058	PGC	P20142	388 aa		15.3	■□□□□ 0.04
TOM1-210	ENST00000449058	SGCB	Q16585	318 aa		15.3	■□□□□ 0.04
TOM1-210	ENST00000449058	PRAMEF17	Q5VTA0	474 aa		15.3	■□□□□ 0.04

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