RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 FBXW5Q969U6 566 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 CCDC124Q96CT7 223 aaKnown RBP12.94□□□□□ -0.34
HDAC4-204ENST00000446876 SLC25A44Q96H78 314 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-204ENST00000446876 TNFRSF13CQ96RJ3 184 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 ZNF347Q96SE7 839 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 ANKRD19PQ9H560 264 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 OBP2BQ9NPH6 170 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 BEX4Q9NWD9 120 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-204ENST00000446876 GLTPQ9NZD2 209 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 ACTR3BQ9P1U1 418 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 LAMP3Q9UQV4 416 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 POFUT2Q9Y2G5 429 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 MAGED1Q9Y5V3 778 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-204ENST00000446876 PLCE1Q9P212 2302 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 TCRBV5S2A0A599 114 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 E7EQL1 145 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 ATP6V1G2-DDX39BF2Z307 99 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 TRMUO75648 421 aaKnown RBP12.93□□□□□ -0.34
HDAC4-204ENST00000446876 IGHG1P01857 330 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 FABP3P05413 133 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 SOD3P08294 240 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 CLRN1P58418 232 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 ARMC4Q5T2S8 1044 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 LRFN4Q6PJG9 635 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 SPNS3Q6ZMD2 512 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 ZNF813Q6ZN06 617 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 RRM2BQ7LG56 351 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 OAFQ86UD1 273 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 KRTAP1-3Q8IUG1 177 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 RNF113BQ8IZP6 322 aaKnown RBP12.93□□□□□ -0.34
HDAC4-204ENST00000446876 HDAC2Q92769 488 aaKnown RBP12.93□□□□□ -0.34
HDAC4-204ENST00000446876 PIGTQ969N2 578 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 MCUR1Q96AQ8 359 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 PERPQ96FX8 193 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 DHRS1Q96LJ7 313 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 SLC38A2Q96QD8 506 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 SEPHS2Q99611 448 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 FOXB1Q99853 325 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 FUZQ9BT04 418 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 NOX3Q9HBY0 568 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 CISD1Q9NZ45 108 aaKnown RBP12.93□□□□□ -0.34
HDAC4-204ENST00000446876 POU2F3Q9UKI9 436 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 USF3Q68DE3 2245 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 F8P00451 2351 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 CELSR1Q9NYQ6 3014 aa12.93□□□□□ -0.34
HDAC4-204ENST00000446876 ARID1AO14497 2285 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 SMPD2O60906 423 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 HLA-HP01893 362 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 QDPRP09417 244 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 CECR9P0C854 216 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 DANCRP0C864 163 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 ACADSP16219 412 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 ZNF26P17031 533 aaPredicted RBP12.92□□□□□ -0.34
HDAC4-204ENST00000446876 ITGA2P17301 1181 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 DAP3P51398 398 aaKnown RBP12.92□□□□□ -0.34
HDAC4-204ENST00000446876 IDH3GP51553 393 aaPredicted RBP12.92□□□□□ -0.34
HDAC4-204ENST00000446876 CTXN1P60606 82 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 FMODQ06828 376 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 NPRL3Q12980 569 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 PGGHGQ32M88 737 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 MDP1Q86V88 176 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 ZDHHC21Q8IVQ6 265 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 ARHGAP24Q8N264 748 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 CLDN22Q8N7P3 220 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 OR4K5Q8NGD3 323 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 SMAP2Q8WU79 429 aaPredicted RBP12.92□□□□□ -0.34
HDAC4-204ENST00000446876 TMEM171Q8WVE6 324 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 RADILQ96JH8 1075 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 TSPAN32Q96QS1 320 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 THTPAQ9BU02 230 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 MRPL13Q9BYD1 178 aaKnown RBP12.92□□□□□ -0.34
HDAC4-204ENST00000446876 TXNIPQ9H3M7 391 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 ZNF224Q9NZL3 707 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 PRPF19Q9UMS4 504 aaKnown RBP12.92□□□□□ -0.34
HDAC4-204ENST00000446876 MOKQ9UQ07 419 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 MGAT4BQ9UQ53 548 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 ATP23Q9Y6H3 246 aa12.92□□□□□ -0.34
HDAC4-204ENST00000446876 MED13LQ71F56 2210 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 IGKV1D-43A0A0B4J1Z2 117 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 HTR3EA5X5Y0 456 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 DHHO43323 396 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 GADD45GO95257 159 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 SLC2A10O95528 541 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 CD79AP11912 226 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 RRM2P31350 389 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 OMPP47874 163 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 LIMS1P48059 325 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 SLC9A3P48764 834 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 PIGFQ07326 219 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 TRIM25Q14258 630 aaKnown RBP12.91□□□□□ -0.34
HDAC4-204ENST00000446876 LCN8Q6JVE9 175 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 TMPRSS11FQ6ZWK6 438 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 DHFR2Q86XF0 187 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 CDK20Q8IZL9 346 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 WFDC11Q8NEX6 87 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 FGFBP3Q8TAT2 258 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 MCHR2Q969V1 340 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 GTPBP3Q969Y2 492 aaKnown RBP12.91□□□□□ -0.34
HDAC4-204ENST00000446876 GPA33Q99795 319 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 C1orf21Q9H246 121 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms