RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 S1PR1P21453 382 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 FCARP24071 287 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 DHODHQ02127 395 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 C1orf61Q13536 156 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 ALKBH1Q13686 389 aaKnown RBP12.93□□□□□ -0.34
ERCC3-203ENST00000445889 OLFML2AQ68BL7 652 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 OR10K2Q6IF99 312 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 LRRN1Q6UXK5 716 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 DPY19L2P2Q6ZN68 376 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 PDZD9Q8IXQ8 264 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 YAF2Q8IY57 180 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 BVESQ8NE79 360 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 PNPLA2Q96AD5 504 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 CTHRC1Q96CG8 243 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 MFFQ9GZY8 342 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 SLITRK2Q9H156 845 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 ZNF275Q9NSD4 429 aaPredicted RBP12.93□□□□□ -0.34
ERCC3-203ENST00000445889 C14orf105Q9NVL8 296 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 ERVK-19Q9WJR5 959 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 SLC22A13Q9Y226 551 aa12.93□□□□□ -0.34
ERCC3-203ENST00000445889 KRBOX1C9JBD0 128 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 ZNF749O43361 778 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 SDC3O75056 442 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 GLCEO94923 617 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 ADH1BP00325 375 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 HLA-DQA2P01906 255 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 APODP05090 189 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 RAB40ALP0C0E4 278 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 PPP3CBP16298 524 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 CCKBRP32239 447 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 CAPZA2P47755 286 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 ZNHIT3Q15649 155 aaPredicted RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 TMEM196Q5HYL7 178 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 ZNF776Q68DI1 518 aaPredicted RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 ZNF660Q6AZW8 331 aaPredicted RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 OR2AK2Q8NG84 335 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 RAB40AQ8WXH6 277 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 SEC22AQ96IW7 307 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 SYT4Q9H2B2 425 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 EXO5Q9H790 373 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 IL23AQ9NPF7 189 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 EXOSC3Q9NQT5 275 aaKnown RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 LAMP5Q9UJQ1 280 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 HRH3Q9Y5N1 445 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 HEBP2Q9Y5Z4 205 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 IGKV1D-42A0A075B6H8 117 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 A0A087WUJ7 227 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 CCSO14618 274 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 GLSO94925 669 aaPredicted RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 ITGA5P08648 1049 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 ZNF10P21506 573 aaPredicted RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 BAMBIQ13145 260 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 RBMS2Q15434 407 aaKnown RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 CD226Q15762 336 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 C1QL3Q5VWW1 255 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 ELP2Q6IA86 826 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 FAM109BQ6ICB4 259 aaPredicted RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 LIN54Q6MZP7 749 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 LINC00114Q6XXX2 140 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 FAM220AQ7Z4H9 259 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 MDGA2Q7Z553 956 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 LRRTM1Q86UE6 522 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 PRR22Q8IZ63 422 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 SLC25A28Q96A46 364 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 SLC22A18Q96BI1 424 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 C3orf49Q96BT1 292 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 NARS2Q96I59 477 aaKnown RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 BMFQ96LC9 184 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 FBXL3Q9UKT7 428 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 FARSAQ9Y285 508 aaKnown RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 CEP290O15078 2479 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 SNRPGP15A8MWD9 76 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 APEHP13798 732 aaKnown RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 TPMTP51580 245 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 GGTLC2Q14390 218 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 EXOSC6Q5RKV6 272 aaKnown RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 SLC36A1Q7Z2H8 476 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 AVL9Q8NBF6 648 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 FGF14Q92915 247 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 CCDC74AQ96AQ1 378 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 ZNF578Q96N58 590 aaPredicted RBP12.92□□□□□ -0.34
ERCC3-203ENST00000445889 KCNG2Q9UJ96 466 aa12.92□□□□□ -0.34
ERCC3-203ENST00000445889 TUBAL3A6NHL2 446 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 ELOA3DA6NLF2 546 aaPredicted RBP12.91□□□□□ -0.34
ERCC3-203ENST00000445889 SULT1B1O43704 296 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 B3GALNT1O75752 331 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 IL32P24001 234 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 POU3F4P49335 361 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 AKR1C2P52895 323 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 AKR1C1Q04828 323 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 ILF3Q12906 894 aaKnown RBP eCLIP12.91□□□□□ -0.34
ERCC3-203ENST00000445889 KIR2DS3Q14952 304 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 ELOA3BQ3SY89 546 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 ALG10Q5BKT4 473 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 ZNF684Q5T5D7 378 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 TSSK4Q6SA08 328 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 PARM1Q6UWI2 310 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 TFAP2EQ6VUC0 442 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 PRSS35Q8N3Z0 413 aa12.91□□□□□ -0.34
ERCC3-203ENST00000445889 ELOA3Q8NG57 546 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms