RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 OR5M10Q6IEU7 315 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 TRAPPC6BQ86SZ2 158 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 ELF4Q99607 663 aaPredicted RBP15.24■□□□□ 0.03
TCOF1-206ENST00000445265 C1orf198Q9H425 327 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 GREM1O60565 184 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 GAAP10253 952 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 TNK1Q13470 666 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 GLYATL3Q5SZD4 288 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 ETFBKMTQ8IXQ9 262 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 STK35Q8TDR2 534 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 SPTSSAQ969W0 71 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 ST6GAL2Q96JF0 529 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 SYT3Q9BQG1 590 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 SLC5A7Q9GZV3 580 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 CA14Q9ULX7 337 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 BRCA1P38398 1863 aaKnown RBP15.24■□□□□ 0.03
TCOF1-206ENST00000445265 A0A1B0GUH1 482 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 ST6GAL1P15907 406 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 ANXA7P20073 488 aaKnown RBP15.24■□□□□ 0.03
TCOF1-206ENST00000445265 ITGB8P26012 769 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 KIRREL2Q6UWL6 708 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 ADGRE4PQ86SQ3 457 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 DUSP18Q8NEJ0 188 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 AIFM2Q9BRQ8 373 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 ERVMER34-1Q9H9K5 563 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 EMC9Q9Y3B6 208 aa15.24■□□□□ 0.03
TCOF1-206ENST00000445265 URB1O60287 2271 aaKnown RBP15.24■□□□□ 0.03
TCOF1-206ENST00000445265 A0A0B4J203 849 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 HSPB2A8KAH6 182 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 SULT2B1O00204 365 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 KNG1P01042 644 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 IL10RAQ13651 578 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 HSPB2Q16082 182 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 SGPP2Q8IWX5 399 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 CMTM3Q96MX0 182 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 CNTNAP3BQ96NU0 1288 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 ULBP3Q9BZM4 244 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 ACTBL2Q562R1 376 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 BARHL1Q9BZE3 327 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 SUSD2Q9UGT4 822 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 ANK1P16157 1881 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 SERPINA5P05154 406 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 CD1CP29017 333 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 RPL27P61353 136 aaKnown RBP15.23■□□□□ 0.03
TCOF1-206ENST00000445265 HTRA4P83105 476 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-206ENST00000445265 CAMK2DQ13557 499 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 ZMYND11Q15326 602 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 MLF2Q15773 248 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-206ENST00000445265 TMEM196Q5HYL7 178 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 COX15Q7KZN9 410 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 C16orf52Q8NHV5 167 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 RGCCQ9H4X1 137 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 A0A0B4J2E0 115 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 A0A1B0GX12 115 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 RGS13O14921 159 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 DUSP3P51452 185 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-206ENST00000445265 BTN1A1Q13410 526 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 CD300LFQ8TDQ1 290 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 SCARB1Q8WTV0 552 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 ASB12Q8WXK4 309 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 ST6GALNAC5Q9BVH7 336 aa15.23■□□□□ 0.03
TCOF1-206ENST00000445265 RBM24Q9BX46 236 aaKnown RBP15.23■□□□□ 0.03
TCOF1-206ENST00000445265 NKX2-2O95096 273 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 HRGP04196 525 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 PPICP45877 212 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 MC2RQ01718 297 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 ELAVL1Q15717 326 aaKnown RBP15.22■□□□□ 0.03
TCOF1-206ENST00000445265 SLC22A6Q4U2R8 563 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 C1orf140Q5VVS0 124 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 ZNF585AQ6P3V2 769 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 OR51S1Q8NGJ8 323 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 OR13C9Q8NGT0 318 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 FKRPQ9H9S5 495 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 TNS1Q9HBL0 1735 aaKnown RBP15.22■□□□□ 0.03
TCOF1-206ENST00000445265 F5H5K5 113 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 DIRAS3O95661 229 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 CCNOP22674 350 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 EMDP50402 254 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 C17orf67Q0P5P2 114 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 TCTN1Q2MV58 587 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 RTL6Q6ICC9 239 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 GPR137CQ8N3F9 429 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 PLPP7Q8NBV4 271 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 SCPEP1Q9HB40 452 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 TGM6O95932 706 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 SEC61A1P61619 476 aaKnown RBP15.22■□□□□ 0.03
TCOF1-206ENST00000445265 ARSKQ6UWY0 536 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 C20orf141Q9NUB4 165 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 DHCR7Q9UBM7 475 aaKnown RBP15.22■□□□□ 0.03
TCOF1-206ENST00000445265 ACAD8Q9UKU7 415 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 SNRPGP15A8MWD9 76 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 GPR171O14626 319 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 GCM2O75603 506 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-206ENST00000445265 ZFAND5O76080 213 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 NAGAP17050 411 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 HOXC12P31275 282 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 RAG2P55895 527 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 EGR3Q06889 387 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 Q6ZTK2 550 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 GRINAQ7Z429 371 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms