RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 NMNAT3Q96T66 252 aa13.14□□□□□ -0.31
PLOD3-205ENST00000440925 POLDIP3Q9BY77 421 aaKnown RBP13.14□□□□□ -0.31
PLOD3-205ENST00000440925 NMNAT2Q9BZQ4 307 aa13.14□□□□□ -0.31
PLOD3-205ENST00000440925 TBC1D23Q9NUY8 699 aa13.14□□□□□ -0.31
PLOD3-205ENST00000440925 SMPD3Q9NY59 655 aaPredicted RBP13.14□□□□□ -0.31
PLOD3-205ENST00000440925 ZNF226Q9NYT6 803 aa13.14□□□□□ -0.31
PLOD3-205ENST00000440925 KIF17Q9P2E2 1029 aa13.14□□□□□ -0.31
PLOD3-205ENST00000440925 HIVEP3Q5T1R4 2406 aa13.14□□□□□ -0.31
PLOD3-205ENST00000440925 NCOA6Q14686 2063 aaPredicted RBP13.14□□□□□ -0.31
PLOD3-205ENST00000440925 CLEC18AA5D8T8 446 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 SURF4O15260 269 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 ARHGEF9O43307 516 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 IDH3BO43837 385 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 PRKYO43930 277 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 MRPL33O75394 65 aaKnown RBP13.13□□□□□ -0.31
PLOD3-205ENST00000440925 CLIC3O95833 236 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 GABRB1P18505 474 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 NOS3P29474 1203 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 GRK5P34947 590 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 FMODQ06828 376 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 TAF11Q15544 211 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 TMEM201Q5SNT2 666 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 GPR139Q6DWJ6 353 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 LAIR2Q6ISS4 152 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 RPL13AP3Q6NVV1 102 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 SLC27A4Q6P1M0 643 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 SLC25A47Q6Q0C1 308 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 CLEC18BQ6UXF7 455 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 BCDIN3DQ7Z5W3 292 aaKnown RBP13.13□□□□□ -0.31
PLOD3-205ENST00000440925 CYB561A3Q8NBI2 242 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 CLEC18CQ8NCF0 446 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 OR2T33Q8NG76 320 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 OR52E2Q8NGJ4 325 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 OR6K3Q8NGY3 331 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 LILRB4Q8NHJ6 448 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 ITLN2Q8WWU7 325 aaPredicted RBP13.13□□□□□ -0.31
PLOD3-205ENST00000440925 TFAP2CQ92754 450 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 LRR1Q96L50 414 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 ZFP3Q96NJ6 502 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 TSSK2Q96PF2 358 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 PITX2Q99697 317 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 MED20Q9H944 212 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 TVP23BQ9NYZ1 205 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 VSX1Q9NZR4 365 aaPredicted RBP13.13□□□□□ -0.31
PLOD3-205ENST00000440925 GRHPRQ9UBQ7 328 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 ZNF629Q9UEG4 869 aaPredicted RBP13.13□□□□□ -0.31
PLOD3-205ENST00000440925 RCE1Q9Y256 329 aa13.13□□□□□ -0.31
PLOD3-205ENST00000440925 UBR5O95071 2799 aaPredicted RBP13.13□□□□□ -0.31
PLOD3-205ENST00000440925 PCNX1Q96RV3 2341 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 LOC100130705A0A1B0GUX0 176 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 PRSS37A4D1T9 235 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 ZNF726A6NNF4 738 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 A8MXE2 369 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 H0YJX3 145 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 ZG16O60844 167 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 GNAO1P09471 354 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 CD8BP10966 210 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 GGT2P36268 569 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 CASP6P55212 293 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 PER3P56645 1201 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.12□□□□□ -0.31
PLOD3-205ENST00000440925 ITGADQ13349 1161 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 C22orf34Q6ZV56 151 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 USP51Q70EK9 711 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 OR6V1Q8N148 313 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 GABRG1Q8N1C3 465 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 TEX47Q8TBZ9 253 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 MCHR2Q969V1 340 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 ADAD1Q96M93 576 aaKnown RBP13.12□□□□□ -0.31
PLOD3-205ENST00000440925 SFXN3Q9BWM7 321 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 LINC00470Q9BZP3 86 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 FN3KQ9H479 309 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 GPR35Q9HC97 309 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 CMC2Q9NRP2 79 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 GLTPQ9NZD2 209 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 EMC3Q9P0I2 261 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 UGT2A1Q9Y4X1 527 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 FLNCQ14315 2725 aa13.12□□□□□ -0.31
PLOD3-205ENST00000440925 INTS1Q8N201 2190 aaKnown RBP13.12□□□□□ -0.31
PLOD3-205ENST00000440925 FAM183AA6NL82 134 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 RPL36A-HNRNPH2H7BZ11 118 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 M0R3G1 203 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 GPANK1O95872 356 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 CLUP10909 449 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 CTLA4P16410 223 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 BMP5P22003 454 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 OPRM1P35372 400 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 DAP3P51398 398 aaKnown RBP13.11□□□□□ -0.31
PLOD3-205ENST00000440925 RPS6KA3P51812 740 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 RAD23AP54725 363 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 KRR1Q13601 381 aaKnown RBP13.11□□□□□ -0.31
PLOD3-205ENST00000440925 CRMP1Q14194 572 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 CASP12Q6UXS9 341 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 SDR9C7Q8NEX9 313 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 BBS1Q8NFJ9 593 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 APH1AQ96BI3 265 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 RDH12Q96NR8 316 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 TACO1Q9BSH4 297 aaKnown RBP13.11□□□□□ -0.31
PLOD3-205ENST00000440925 NUAK2Q9H093 628 aa13.11□□□□□ -0.31
PLOD3-205ENST00000440925 SRA1Q9HD15 236 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms