RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 C9J4A7 227 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 FAM47E-STBD1D6RA91 191 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 BLOC1S5-TXNDC5H3BN57 136 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 PDCD5O14737 125 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 ZNF208O43345 1280 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 SCO2O43819 266 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 TMCC2O75069 709 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 NPIPB7O75200 414 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 GYPBP06028 91 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 GP1BAP07359 652 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 CD63P08962 238 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 UCHL1P09936 223 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 CLEC2LP0C7M8 214 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 TRAPPC2P0DI81 140 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 TRAPPC2BP0DI82 140 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 CLUP10909 449 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 GTF2E2P29084 291 aaKnown RBP8.26□□□□□ -1.09
HDAC6-209ENST00000440653 AQP2P41181 271 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 NAA10P41227 235 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-209ENST00000440653 APOBEC1P41238 236 aaKnown RBP8.26□□□□□ -1.09
HDAC6-209ENST00000440653 NR4A2P43354 598 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 DAP3P51398 398 aaKnown RBP8.26□□□□□ -1.09
HDAC6-209ENST00000440653 EFNA3P52797 238 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 EMP2P54851 167 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 OR12D2P58182 307 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 RAP1BP61224 184 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 RAP1AP62834 184 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 SIRPAP78324 504 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 CCL7P80098 99 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 EGR3Q06889 387 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 C17orf67Q0P5P2 114 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 SRSF6Q13247 344 aaKnown RBP8.26□□□□□ -1.09
HDAC6-209ENST00000440653 CLN3Q13286 438 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 MESTQ5EB52 335 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 LINC01590Q5TEZ4 76 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 C1orf140Q5VVS0 124 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 FCRLBQ6BAA4 426 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 SFXN4Q6P4A7 337 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 DNM1P34Q6PK57 102 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 TMEM205Q6UW68 189 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 CPEB2Q7Z5Q1 589 aaKnown RBP8.26□□□□□ -1.09
HDAC6-209ENST00000440653 PRSS58Q8IYP2 241 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 LRRC17Q8N6Y2 441 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 NFAM1Q8NET5 270 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-209ENST00000440653 ASB17Q8WXJ9 295 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 NANOS1Q8WY41 292 aaKnown RBP8.26□□□□□ -1.09
HDAC6-209ENST00000440653 THAP4Q8WY91 577 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 PELI1Q96FA3 418 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 Q96M85 177 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 KLHL15Q96M94 604 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 MOGAT1Q96PD6 335 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 DEPDC7Q96QD5 511 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 TSPAN32Q96QS1 320 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 NMNAT3Q96T66 252 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 SPSB2Q99619 263 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 SDHCQ99643 169 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-209ENST00000440653 CRB3Q9BUF7 120 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 HDHD5Q9BXW7 423 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 RNF32Q9H0A6 362 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 MIXL1Q9H2W2 232 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 MARCH7Q9H992 704 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 INIPQ9NRY2 104 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 SLC22A11Q9NSA0 550 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 MRPL39Q9NYK5 338 aaKnown RBP8.26□□□□□ -1.09
HDAC6-209ENST00000440653 ATXN7L1Q9ULK2 861 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-209ENST00000440653 TMED7Q9Y3B3 224 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 FKBP7Q9Y680 259 aa8.26□□□□□ -1.09
HDAC6-209ENST00000440653 TRBV11-1A0A0K0K1C0 115 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 A0A1W2PNU3 283 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-209ENST00000440653 A0A1W2PQ09 198 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 OR6C68A6NDL8 312 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 NOTOA8MTQ0 251 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 NTN3O00634 580 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-209ENST00000440653 ITGA10O75578 1167 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 ZFAND5O76080 213 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 OR6A2O95222 327 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 KRT8P05787 483 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 RAB3BP20337 219 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 EDNRAP25101 427 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 AZGP1P25311 298 aaKnown RBP8.25□□□□□ -1.09
HDAC6-209ENST00000440653 FKBP2P26885 142 aaKnown RBP8.25□□□□□ -1.09
HDAC6-209ENST00000440653 CCKBRP32239 447 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 RPS5P46782 204 aaKnown RBP8.25□□□□□ -1.09
HDAC6-209ENST00000440653 PYDC2Q56P42 97 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 ZMAT1Q5H9K5 638 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 PRAMEF17Q5VTA0 474 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 EEF1A1P5Q5VTE0 462 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 PWWP2BQ6NUJ5 590 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 MZT2BQ6NZ67 158 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 TMEM81Q6P7N7 255 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 CNIH2Q6PI25 160 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 MARCH3Q86UD3 253 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 AKAP14Q86UN6 197 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 CDC20BQ86Y33 519 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 SNX29P2Q8IUI4 249 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 AGBL5Q8NDL9 886 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 ADPRHL1Q8NDY3 354 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 ZNF519Q8TB69 540 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 GPR119Q8TDV5 335 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 HTRA1Q92743 480 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms