RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 NDE1Q9NXR1 346 aa20.92■□□□□ 0.94
CPNE1-217ENST00000439669 MAGEL2Q9UJ55 1249 aa20.92■□□□□ 0.94
CPNE1-217ENST00000439669 FAM32AQ9Y421 112 aaKnown RBP20.92■□□□□ 0.94
CPNE1-217ENST00000439669 V9GYQ6 96 aa20.92■□□□□ 0.94
CPNE1-217ENST00000439669 HTR3EA5X5Y0 456 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 ZNF503-AS2A6NEH8 195 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 FAM107AO95990 144 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 IGLV1-44P01699 117 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 CELA3BP08861 270 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 PGA4P0DJD7 388 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 PGA3P0DJD8 388 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 CD79AP11912 226 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 HSD17B1P14061 328 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 NAAAQ02083 359 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 C3orf36Q3SXR2 165 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 ZNF544Q6NX49 715 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 HDDC2Q7Z4H3 204 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 DEFB107AQ8IZN7 70 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 FAM169BQ8N8A8 192 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 ASB10Q8WXI3 467 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 ACOT11Q8WXI4 607 aaPredicted RBP20.91■□□□□ 0.94
CPNE1-217ENST00000439669 NANOS1Q8WY41 292 aaKnown RBP20.91■□□□□ 0.94
CPNE1-217ENST00000439669 SEC61A2Q9H9S3 476 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 CBLN4Q9NTU7 201 aa20.91■□□□□ 0.94
CPNE1-217ENST00000439669 PRSS23O95084 383 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 IGKV3-15P01624 115 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 HLA-HP01893 362 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 FOSL1P15407 271 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 MAKP20794 623 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 ARR3P36575 388 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 LAPTM4AQ15012 233 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 ALG10Q5BKT4 473 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 FAM86B1Q8N7N1 296 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 CCDC197Q8NCU1 140 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 NOXO1Q8NFA2 376 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 C18orf12Q96KH6 178 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 GRIP2Q9C0E4 1043 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 PLCE1Q9P212 2302 aa20.9■□□□□ 0.94
CPNE1-217ENST00000439669 A0A087WUU8 490 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 TRIM64A6NGJ6 449 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 TRIM64BA6NI03 449 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 EFCAB9A8MZ26 197 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 hCG_2039718K7EN88 272 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 MSX2P35548 267 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-217ENST00000439669 MNAT1P51948 309 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 PRKCDQ05655 676 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 RUNX1T1Q06455 604 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 TOP3AQ13472 1001 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-217ENST00000439669 KRT72Q14CN4 511 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 GSG1Q2KHT4 349 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 ZNF627Q7L945 461 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 RRM2BQ7LG56 351 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 TSEN54Q7Z6J9 526 aaKnown RBP20.89■□□□□ 0.93
CPNE1-217ENST00000439669 RNF113BQ8IZP6 322 aaKnown RBP20.89■□□□□ 0.93
CPNE1-217ENST00000439669 FITM2Q8N6M3 262 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 CACNG6Q9BXT2 260 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 GORASP2Q9H8Y8 452 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 NMNAT1Q9HAN9 279 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-217ENST00000439669 NDUFAF4Q9P032 175 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 STX18Q9P2W9 335 aaKnown RBP20.89■□□□□ 0.93
CPNE1-217ENST00000439669 HIF3AQ9Y2N7 669 aa20.89■□□□□ 0.93
CPNE1-217ENST00000439669 H7C1Q1 480 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 DHHO43323 396 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 H1F0P07305 194 aaKnown RBP20.88■□□□□ 0.93
CPNE1-217ENST00000439669 QDPRP09417 244 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 TSPAN19P0C672 248 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 ACADSP16219 412 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 APOBEC3AP31941 199 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-217ENST00000439669 MYBPC1Q00872 1141 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 PIGFQ07326 219 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 FGD3Q5JSP0 725 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 LRFN4Q6PJG9 635 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 TBPL2Q6SJ96 375 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 MBOAT2Q6ZWT7 520 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 MYPOPQ86VE0 399 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-217ENST00000439669 CDK20Q8IZL9 346 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 SYT14Q8NB59 555 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 OR13C2Q8NGS9 318 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 OR51A7Q8NH64 312 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 NSMCE2Q96MF7 247 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 ZNF347Q96SE7 839 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 BDH2Q9BUT1 245 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 ANKRD19PQ9H560 264 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 NOX3Q9HBY0 568 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 CD300AQ9UGN4 299 aa20.88■□□□□ 0.93
CPNE1-217ENST00000439669 TRAV27A0A087WT01 109 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 ARPC2O15144 300 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 TRMUO75648 421 aaKnown RBP20.87■□□□□ 0.93
CPNE1-217ENST00000439669 INHBBP09529 407 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 RHCEP18577 417 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 CALCRP30988 508 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 GPR4P46093 362 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 FXNQ16595 210 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 C11orf71Q6IPW1 123 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 VHLLQ6RSH7 139 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 OAFQ86UD1 273 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 IGFN1Q86VF2 1251 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 MCHR2Q969V1 340 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 TXNIPQ9H3M7 391 aa20.87■□□□□ 0.93
CPNE1-217ENST00000439669 TMEM38BQ9NVV0 291 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms