RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 HDDC2Q7Z4H3 204 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 C19orf47Q8N9M1 422 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 CADM4Q8NFZ8 388 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 CHIAQ9BZP6 476 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 OR10A5Q9H207 317 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 CA10Q9NS85 328 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 PCDHGA5Q9Y5G8 931 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 VPS13AQ96RL7 3174 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 PLSCR5A0PG75 271 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 CIB4A0PJX0 185 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 SNRPGP15A8MWD9 76 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 BLOC1S5-TXNDC5H3BN57 136 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 K7ESF4 209 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 SCAND1P57086 179 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 FAAP20Q6NZ36 180 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 MCATQ8IVS2 390 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 SLC38A6Q8IZM9 456 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 ZNF615Q8N8J6 731 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 AVL9Q8NBF6 648 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 CCDC74AQ96AQ1 378 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 ADAD1Q96M93 576 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 ZNF578Q96N58 590 aaPredicted RBP14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 MOGAT1Q96PD6 335 aa14.89□□□□□ -0.03
CLCNKA-203ENST00000439316 TRBV5-7A0A0A0MS05 114 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 OR2M5A3KFT3 312 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 GLSO94925 669 aaPredicted RBP14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 PDGFBP01127 241 aaPredicted RBP14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 CLPSP04118 112 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 ASAH2BP0C7U1 165 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 ZNF250P15622 560 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 ANXA7P20073 488 aaKnown RBP14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 C4BPBP20851 252 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 CSRP1P21291 193 aaKnown RBP14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 SOX2P48431 317 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 CTXN1P60606 82 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 RAP2BP61225 183 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 BTG2P78543 158 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 CBFBQ13951 182 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 OPCMLQ14982 345 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 ALG10Q5BKT4 473 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 ZSCAN1Q8NBB4 408 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 ADAMTS18Q8TE60 1221 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 PCNPQ8WW12 178 aaKnown RBP14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 GSX2Q9BZM3 304 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 FKRPQ9H9S5 495 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 GPN1Q9HCN4 374 aaPredicted RBP14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 MMP25Q9NPA2 562 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 ZNF69Q9UC07 566 aa14.88□□□□□ -0.03
CLCNKA-203ENST00000439316 THADAQ6YHU6 1953 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 OR4C45A6NMZ5 311 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 OIP5O43482 229 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 CREBL2O60519 120 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 ZNF254O75437 659 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 ZNF432O94892 652 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 OR2A4O95047 310 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 ALDOBP05062 364 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 BCKDHBP21953 392 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 ADH7P40394 386 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 RAB14P61106 215 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 SKP1P63208 163 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 MAT1AQ00266 395 aaKnown RBP14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 DMWDQ09019 674 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 SKP2Q13309 424 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 CD226Q15762 336 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 WDR45BQ5MNZ6 344 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 ARMC6Q6NXE6 501 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 PARGQ86W56 976 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 TMPRSS12Q86WS5 348 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 MEIOBQ8N635 442 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 C10orf53Q8N6V4 93 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 GATSQ8NAP1 163 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 DNAAF1Q8NEP3 725 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 OR2A7Q96R45 310 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 TMPRSS13Q9BYE2 586 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 PCED1AQ9H1Q7 454 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 PPIEQ9UNP9 301 aaKnown RBP14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 TECTAO75443 2155 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 TRAV8-7A0A075B6U6 113 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 A0A1W2PPL8 197 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 DCTN6O00399 190 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 CLDN4O14493 209 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 TMIGD3P0DMS9 266 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 CTSEP14091 401 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 CXCL2P19875 107 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 MAOAP21397 527 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 CD38P28907 300 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 HHEXQ03014 270 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 EGR4Q05215 589 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 LTBQ06643 244 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 C1orf61Q13536 156 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 ERV3-1Q14264 604 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 SMUG1Q53HV7 270 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 MESTQ5EB52 335 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 EMC4Q5J8M3 183 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 FAM174AQ8TBP5 190 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 OIT3Q8WWZ8 545 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 LMF1Q96S06 567 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 MNTQ99583 582 aa14.87□□□□□ -0.03
CLCNKA-203ENST00000439316 CABIN1Q9Y6J0 2220 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms