RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 MRGPRX4Q96LA9 322 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 ECM29Q5VYK3 1845 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 EVPLQ92817 2033 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 PPIHO43447 177 aaKnown RBP11.07□□□□□ -0.64
NEK1-201ENST00000439128 GUSBP08236 651 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 COX6B1P14854 86 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 TMEM11P17152 192 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 PTPN6P29350 595 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 ARHGAP11BQ3KRB8 267 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 TMPRSS7Q7RTY8 843 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 CD300LFQ8TDQ1 290 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 SPIN2AQ99865 258 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 SPIN2BQ9BPZ2 258 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 TUBA1CQ9BQE3 449 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 NUDT9Q9BW91 350 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 VN1R1Q9GZP7 353 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 TNFRSF19Q9NS68 423 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 SLC22A11Q9NSA0 550 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 KIAA1456Q9P272 454 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 SPRY3O43610 288 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 BCAS1O75363 584 aaPredicted RBP11.07□□□□□ -0.64
NEK1-201ENST00000439128 CD14P08571 375 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 GLRA1P23415 457 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 POU4F3Q15319 338 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 KCTD20Q7Z5Y7 419 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 ANKRD37Q7Z713 158 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 ZNF554Q86TJ5 538 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 ST8SIA1Q92185 356 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 TAAR8Q969N4 342 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 CPNE4Q96A23 557 aaPredicted RBP11.07□□□□□ -0.64
NEK1-201ENST00000439128 TAMM41Q96BW9 452 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 SELENOIQ9C0D9 397 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 GCM1Q9NP62 436 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 MBD1Q9UIS9 605 aaPredicted RBP11.07□□□□□ -0.64
NEK1-201ENST00000439128 MYO7AQ13402 2215 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 SSX5O60225 188 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 TUBG1P23258 451 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 PAN3Q58A45 887 aaKnown RBP11.07□□□□□ -0.64
NEK1-201ENST00000439128 ZNF468Q5VIY5 522 aaPredicted RBP11.07□□□□□ -0.64
NEK1-201ENST00000439128 FAM83FQ8NEG4 500 aaPredicted RBP11.07□□□□□ -0.64
NEK1-201ENST00000439128 SDF2Q99470 211 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 ANKRD19PQ9H560 264 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 GORASP2Q9H8Y8 452 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 SIDT1Q9NXL6 827 aaKnown RBP11.07□□□□□ -0.64
NEK1-201ENST00000439128 TCHHQ07283 1943 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 H2AFB2P0C5Z0 115 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 BDKRB2P30411 391 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 OR5T1Q8NG75 326 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 TFAP2CQ92754 450 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 OXGR1Q96P68 337 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 SGPP1Q9BX95 441 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 SLC5A6Q9Y289 635 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 V9GY05 133 aa11.07□□□□□ -0.64
NEK1-201ENST00000439128 CCL21O00585 134 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 GASTP01350 101 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 C7P10643 843 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 PRKACAP17612 351 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 LCN1P31025 176 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 JMJD6Q6NYC1 403 aaPredicted RBP11.06□□□□□ -0.64
NEK1-201ENST00000439128 B3GLCTQ6Y288 498 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 FAM71CQ8NEG0 241 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 SEMA6DQ8NFY4 1073 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 GALNT9Q9HCQ5 603 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 INPP5EQ9NRR6 644 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 ZNF831Q5JPB2 1677 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 SERTM1A2A2V5 107 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 INMT-MINDY4F8WBC2 141 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 CDX4O14627 284 aaPredicted RBP11.06□□□□□ -0.64
NEK1-201ENST00000439128 IFNA1P01562 189 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 TMIGD3P0DMS9 266 aaPredicted RBP11.06□□□□□ -0.64
NEK1-201ENST00000439128 VEGFCP49767 419 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 FOXF1Q12946 379 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 OR4A16Q8NH70 328 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 NOX3Q9HBY0 568 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 OSGIN2Q9Y236 505 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 MRPS28Q9Y2Q9 187 aaKnown RBP11.06□□□□□ -0.64
NEK1-201ENST00000439128 A0A1W2PR80 420 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 ZNF736B4DX44 427 aaPredicted RBP11.06□□□□□ -0.64
NEK1-201ENST00000439128 RAB3DO95716 219 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 IFNA4P05014 189 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 FGL1Q08830 312 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 GALEQ14376 348 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 SPINK14Q6IE38 97 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 HAS2Q92819 552 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 C12orf43Q96C57 262 aaKnown RBP11.06□□□□□ -0.64
NEK1-201ENST00000439128 OR2A14Q96R47 310 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 UBL7Q96S82 380 aaPredicted RBP11.06□□□□□ -0.64
NEK1-201ENST00000439128 TCFL5Q9UL49 500 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 ZNF281Q9Y2X9 895 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 A0A1B0GV50 99 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 DNAJB6O75190 326 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 SERPINA7P05543 415 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 SRP9P49458 86 aaKnown RBP11.06□□□□□ -0.64
NEK1-201ENST00000439128 INSM1Q01101 510 aaPredicted RBP11.06□□□□□ -0.64
NEK1-201ENST00000439128 FOXK2Q01167 660 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 CCDC58Q4VC31 144 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 OVCH1Q7RTY7 1134 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 PKMYT1Q99640 499 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 EHFQ9NZC4 300 aa11.06□□□□□ -0.64
NEK1-201ENST00000439128 PPP5CP53041 499 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms