RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 PLAUP00749 431 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 SH3BGRP55822 239 aaPredicted RBP20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 ARMC4Q5T2S8 1044 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 ANKRD16Q6P6B7 361 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 OR9Q2Q8NGE9 314 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 OR4C15Q8NGM1 316 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 TSPAN32Q96QS1 320 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 KATNB1Q9BVA0 655 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 NELFAQ9H3P2 528 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 SIGLEC7Q9Y286 467 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 POFUT2Q9Y2G5 429 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 ADAM18Q9Y3Q7 739 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 SAMHD1Q9Y3Z3 626 aaKnown RBP20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 HRNRQ86YZ3 2850 aaPredicted RBP20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 TACC2O95359 2948 aa20.88■□□□□ 0.93
RBFOX2-209ENST00000438146 DPRXA6NFQ7 191 aa20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 ZNF99A8MXY4 864 aaPredicted RBP20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 EBAG9O00559 213 aa20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 ACADSP16219 412 aa20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 PRPS1P60891 318 aa20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 RPL27P61353 136 aaKnown RBP20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 BSPH1Q075Z2 132 aa20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 ANKDD1AQ495B1 522 aa20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 NOXO1Q8NFA2 376 aa20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 HDAC2Q92769 488 aaKnown RBP20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 ESRP2Q9H6T0 727 aaKnown RBP20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 REEP1Q9H902 201 aa20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 AMDHD2Q9Y303 409 aa20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 NOTCH2Q04721 2471 aa20.87■□□□□ 0.93
RBFOX2-209ENST00000438146 TCRBV3S1A0A5B6 114 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 M0R1B8 84 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 PTP4A3O75365 173 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 CST1P01037 141 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 QDPRP09417 244 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 ACVR1BP36896 505 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 IFNGR2P38484 337 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 HMGA2P52926 109 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 NR1H2P55055 460 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 UBE2NP61088 152 aaKnown RBP20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 NCMAPQ5T1S8 102 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 C1orf146Q5VVC0 180 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 PGBD2Q6P3X8 592 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 LRFN4Q6PJG9 635 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 THSD4Q6ZMP0 1018 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 CLDN22Q8N7P3 220 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 MRPL13Q9BYD1 178 aaKnown RBP20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 PLEKHF2Q9H8W4 249 aa20.86■□□□□ 0.93
RBFOX2-209ENST00000438146 CCNB2O95067 398 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 NDUFB2O95178 105 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 IGHMP01871 453 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 B4GALT1P15291 398 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 CAPZA2P47755 286 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 IST1P53990 364 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 FXYD6P3P58550 94 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 CD47Q08722 323 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 ZNF813Q6ZN06 617 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 ZNF704Q6ZNC4 412 aaPredicted RBP20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 ASRGL1Q7L266 308 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 HDDC2Q7Z4H3 204 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 CDH24Q86UP0 819 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 FANK1Q8TC84 345 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 GNPDA2Q8TDQ7 276 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 HTRA1Q92743 480 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 MCHR2Q969V1 340 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 MMADHCQ9H3L0 296 aaPredicted RBP20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 UBTD1Q9HAC8 227 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 PRR14LQ5THK1 2151 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 NPIPB13A6NJU9 1138 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 NPIPB4C9JG80 1138 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 H7C1C5 153 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 FKBP6O75344 327 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 WNT11O96014 354 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 CD3EP07766 207 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 CD14P08571 375 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 FPR3P25089 353 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 LCN6P62502 163 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 FMODQ06828 376 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 ADAM5Q6NVV9 412 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 C1orf94Q6P1W5 598 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 ZNF519Q8TB69 540 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 SLCO4A1Q96BD0 722 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 Q96M85 177 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 FOXB1Q99853 325 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 NDEL1Q9GZM8 345 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 GRHPRQ9UBQ7 328 aa20.85■□□□□ 0.93
RBFOX2-209ENST00000438146 GNGT2O14610 69 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 DHHO43323 396 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 SLC2A10O95528 541 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 SPOCK1Q08629 439 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 TAF11Q15544 211 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 SMARCD3Q6STE5 483 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 KLHL17Q6TDP4 642 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 SSX8Q7RTT4 187 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 AQP11Q8NBQ7 271 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 NSMAFQ92636 917 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 STX18Q9P2W9 335 aaKnown RBP20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 PLEKHA6Q9Y2H5 1048 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 RNF115Q9Y4L5 304 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 CSMD2Q7Z408 3487 aa20.84■□□□□ 0.93
RBFOX2-209ENST00000438146 ALPK2Q86TB3 2170 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms