RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SFXN4Q6P4A7 337 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 OPN5Q6U736 354 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 DRAXINQ8NBI3 349 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-216ENST00000437340 ARL5BQ96KC2 179 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 ZPBPQ9BS86 351 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 SERINC1Q9NRX5 453 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 ZNF281Q9Y2X9 895 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 HRH3Q9Y5N1 445 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 CHCHD2Q9Y6H1 151 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-216ENST00000437340 TEX51A0A1B0GUA7 166 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 A6NIZ1 184 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 AKR7A3O95154 331 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 ABHD16AO95870 558 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 DLGAP3O95886 979 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 KRT8P05787 483 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 HNRNPCP07910 306 aaKnown RBP eCLIP23.13■■□□□ 1.297e-7■■■□□ 17.1
CPNE1-216ENST00000437340 PSMB10P40306 273 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 RAP1BP61224 184 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 RAP1AP62834 184 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 IDNKQ5T6J7 187 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 CNIH2Q6PI25 160 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 OR2M3Q8NG83 312 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 OR13C5Q8NGS8 318 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 OR6N2Q8NGY6 317 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 HTRA1Q92743 480 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 FRMD6Q96NE9 622 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 STRADBQ9C0K7 418 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 FANCFQ9NPI8 374 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 TIGARQ9NQ88 270 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 ALKBH4Q9NXW9 302 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 MRM2Q9UI43 246 aaKnown RBP23.13■■□□□ 1.29
CPNE1-216ENST00000437340 TBC1D24Q9ULP9 559 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 KLHDC2Q9Y2U9 406 aa23.13■■□□□ 1.29
CPNE1-216ENST00000437340 A0A0G2JK05 382 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 SLC22A23A1A5C7 686 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 MS4A18H0YCH9 400 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 SEC14L5O43304 696 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 INSM1Q01101 510 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-216ENST00000437340 SCN1BQ07699 218 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 RIN1Q13671 783 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 OR7A5Q15622 319 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 MS4A18Q3C1V0 323 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 YIF1BQ5BJH7 314 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 NDUFAF7Q7L592 441 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 GDPD3Q7L5L3 318 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 DND1Q8IYX4 353 aaKnown RBP23.12■■□□□ 1.29
CPNE1-216ENST00000437340 FADS6Q8N9I5 356 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 RNF166Q96A37 237 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-216ENST00000437340 UBL7Q96S82 380 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-216ENST00000437340 PDCD1LG2Q9BQ51 273 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 PPP1R3EQ9H7J1 279 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 CHST11Q9NPF2 352 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 LOXL2Q9Y4K0 774 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 FAM47E-STBD1D6RA91 191 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 UPK3AO75631 287 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 RAB3BP20337 219 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 AZGP1P25311 298 aaKnown RBP23.12■■□□□ 1.29
CPNE1-216ENST00000437340 CRABP1P29762 137 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 DAP3P51398 398 aaKnown RBP23.12■■□□□ 1.29
CPNE1-216ENST00000437340 FAM205BPQ63HN1 556 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 DPY19L4Q7Z388 723 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 OR11G2Q8NGC1 345 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 POC1BQ8TC44 478 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 CDC6Q99741 560 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 B3GALT5Q9Y2C3 310 aa23.12■■□□□ 1.29
CPNE1-216ENST00000437340 IGLV1-36A0A0B4J1U3 117 aa23.11■■□□□ 1.29
CPNE1-216ENST00000437340 LIPT2A6NK58 231 aa23.11■■□□□ 1.29
CPNE1-216ENST00000437340 IL11P20809 199 aa23.11■■□□□ 1.29
CPNE1-216ENST00000437340 YIPF7Q8N8F6 280 aa23.11■■□□□ 1.29
CPNE1-216ENST00000437340 OTOSQ8NHW6 89 aa23.11■■□□□ 1.29
CPNE1-216ENST00000437340 NEURL2Q9BR09 285 aa23.11■■□□□ 1.29
CPNE1-216ENST00000437340 ZCCHC4Q9H5U6 513 aa23.11■■□□□ 1.29
CPNE1-216ENST00000437340 PTGES2Q9H7Z7 377 aa23.11■■□□□ 1.29
CPNE1-216ENST00000437340 EP300Q09472 2414 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-216ENST00000437340 NSG1A0A0A6YYJ2 146 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 CENPBD1B2RD01 187 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 ZNF879B4DU55 563 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 SLC16A7O60669 478 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 STK17BO94768 372 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 OR8G3PP0DMU2 310 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 TFPIP10646 304 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 IMPDH2P12268 514 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 FKBP2P26885 142 aaKnown RBP23.1■■□□□ 1.29
CPNE1-216ENST00000437340 ADH6P28332 368 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 THBS2P35442 1172 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 NANOS3P60323 173 aaKnown RBP23.1■■□□□ 1.29
CPNE1-216ENST00000437340 TLE3Q04726 772 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 PYDC2Q56P42 97 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 LIPNQ5VXI9 398 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 CADM3Q8N126 398 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 PADI1Q9ULC6 663 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 CPAMD8Q8IZJ3 1885 aa23.1■■□□□ 1.29
CPNE1-216ENST00000437340 CELA2AP08217 269 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 EIF1P41567 113 aaKnown RBP23.09■■□□□ 1.29
CPNE1-216ENST00000437340 ALKBH1Q13686 389 aaKnown RBP23.09■■□□□ 1.29
CPNE1-216ENST00000437340 C3orf33Q6P1S2 294 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 LRRC28Q86X40 367 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-216ENST00000437340 ARMC10Q8N2F6 343 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 WDSUB1Q8N9V3 476 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 ADPRHL1Q8NDY3 354 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms