RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 ZNF557Q8N988 423 aaPredicted RBP1.37□□□□□ -2.19
CDC40-204ENST00000431461 OR2L8Q8NGY9 312 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 OR2G2Q8NGZ5 317 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 OR4S2Q8NH73 311 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 RHEBL1Q8TAI7 183 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 MARCH1Q8TCQ1 289 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 GEMIN6Q8WXD5 167 aaKnown RBP1.37□□□□□ -2.19
CDC40-204ENST00000431461 RDH5Q92781 318 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 PIK3IP1Q96FE7 263 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 TCEANC2Q96MN5 208 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 RNF157Q96PX1 679 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 MTMR9Q96QG7 549 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 TAAR1Q96RJ0 339 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 NPY6RQ99463 290 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 TRIM62Q9BVG3 475 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 TMEM59Q9BXS4 323 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 ISYNA1Q9NPH2 558 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 SPATA7Q9P0W8 599 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 CLCF1Q9UBD9 225 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 ZNF639Q9UID6 485 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 MMP17Q9ULZ9 603 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 CLEC4AQ9UMR7 237 aa1.37□□□□□ -2.19
CDC40-204ENST00000431461 CENPJQ9HC77 1338 aaPredicted RBP1.37□□□□□ -2.19
CDC40-204ENST00000431461 TRAV6A0A075B6T7 132 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 IGHV3-66A0A0C4DH42 116 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 A0A1B0GVL5 298 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 A0A1W2PPE3 182 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 H7C0C1 242 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 CDC7O00311 574 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 SURF6O75683 361 aaKnown RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 TMEM50AO95807 157 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 IL1BP01584 269 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 PSMC3P17980 439 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 EIF2S2P20042 333 aaKnown RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 MAGP20916 626 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 PCMT1P22061 227 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 WARSP23381 471 aaKnown RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 F2RP25116 425 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 ATP5C1P36542 298 aaKnown RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 SERPINB5P36952 375 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 ATP5OP48047 213 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 LHX2P50458 406 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 SEC61GP60059 68 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 ADARB1P78563 741 aaKnown RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 ACVR1Q04771 509 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 SF3A2Q15428 464 aaKnown RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 TGFBIQ15582 683 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 NANOGP8Q6NSW7 305 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 IGFL3Q6UXB1 125 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 ZNF621Q6ZSS3 439 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 SLC25A48Q6ZT89 311 aaKnown RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 HDDC2Q7Z4H3 204 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 PSTKQ8IV42 348 aaKnown RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 PDIK1LQ8N165 341 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 ZADH2Q8N4Q0 377 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 OR4C5Q8NGB2 326 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 OR9K2Q8NGE7 335 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 OR56B2PQ8NGI1 322 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 SLC2A14Q8TDB8 520 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 ACTRT1Q8TDG2 376 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 CXorf40AQ8TE69 158 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 SDR42E1Q8WUS8 393 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 GIMAP1Q8WWP7 306 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 ZNF606Q8WXB4 792 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 STARD8Q92502 1023 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 SHC3Q92529 594 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 PHF3Q92576 2039 aaKnown RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 NT5C3BQ969T7 300 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.36□□□□□ -2.19
CDC40-204ENST00000431461 P2RX4Q99571 388 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 FAIM2Q9BWQ8 316 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 GCOM2Q9BZD3 368 aaPredicted RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 TPK1Q9H3S4 243 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 CLMPQ9H6B4 373 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 RAB18Q9NP72 206 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 ADAP2Q9NPF8 381 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 SAMSN1Q9NSI8 373 aaKnown RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 HYPKQ9NX55 129 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 PSMC3IPQ9P2W1 217 aaPredicted RBP1.36□□□□□ -2.19
CDC40-204ENST00000431461 TP53TG5Q9Y2B4 290 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 HEBP2Q9Y5Z4 205 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 MAPK8IP3Q9UPT6 1336 aa1.36□□□□□ -2.19
CDC40-204ENST00000431461 USP47Q96K76 1375 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 LTBP1Q14766 1721 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 IGLV1-50A0A075B6I6 118 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 A0A096LNJ9 63 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 SMCO3A2RU48 225 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 RBMY1BA6NDE4 496 aaKnown RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 RBMY1EA6NEQ0 496 aaKnown RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 TMX2-CTNND1H3BSU7 103 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 MPHOSPH10O00566 681 aaKnown RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 B4GALT5O43286 388 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 TRAF3IP2O43734 574 aaPredicted RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 SS18L1O75177 396 aaPredicted RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 SUPT3HO75486 399 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 CIB2O75838 187 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 FGFR1OPO95684 399 aaKnown RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 KRT14P02533 472 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 RBMY1DP0C7P1 496 aaKnown RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 RBMY1A1P0DJD3 496 aaKnown RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms