RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 Q9H8V8 135 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 KCNK13Q9HB14 408 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 GPN1Q9HCN4 374 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 C20orf96Q9NUD7 363 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 NUDT15Q9NV35 164 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 SLC23A2Q9UGH3 650 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 FETUBQ9UGM5 382 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 CYB5R1Q9UHQ9 305 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 SLC24A2Q9UI40 661 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 NUP50Q9UKX7 468 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 RNF150Q9ULK6 438 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 PCDHGB4Q9UN71 923 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 MEMO1Q9Y316 297 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 ZNF175Q9Y473 711 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 PCYT1BQ9Y5K3 369 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 HCFC1P51610 2035 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 FLNAP21333 2647 aaKnown RBP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 AKAP6Q13023 2319 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 LOC100506127A0A0U1RQW1 187 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 A0A1W2PPW3 197 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 LOC390937A0A1W2PQ73 354 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 GSAPA4D1B5 854 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 GLOD5A6NK44 160 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 PGRMC1O00264 195 aaKnown RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 PEX11AO75192 247 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 SEC22BO75396 215 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 OR2B3O76000 313 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 KRT33AO76009 404 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 IFNA16P05015 189 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 HOXD4P09016 255 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 KRTAP1-4P0C5Y4 121 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 ICAM2P13598 275 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 CCNA2P20248 432 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 PTBP1P26599 531 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 PIK3R1P27986 724 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 EEF1DP29692 281 aaKnown RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 PRDX3P30048 256 aaKnown RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 NSFP46459 744 aaKnown RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 OR3A2P47893 321 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 TNFSF10P50591 281 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 KPNA2P52292 529 aaKnown RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 DCDC1P59894 354 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 MAXP61244 160 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 CAMK2DQ13557 499 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 ARHGAP19Q14CB8 494 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 C3AR1Q16581 482 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 SLC5A12Q1EHB4 618 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 C15orf32Q32M92 178 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 GPR33Q49SQ1 333 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 NKAIN1Q4KMZ8 207 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 ZNF789Q5FWF6 425 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 SAPCD1Q5SSQ6 148 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 HES5Q5TA89 166 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 OR4A47Q6IF82 309 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 NIPAL1Q6NVV3 410 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 DCUN1D2Q6PH85 259 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 LINC00696Q6ZRV3 163 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 ADAMTSL2Q86TH1 951 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 ASPGQ86U10 573 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 TRAPPC5Q8IUR0 188 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 PSTKQ8IV42 348 aaKnown RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 VSTM4Q8IW00 320 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 CCDC36Q8IYA8 594 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 LINC00518Q8N0U6 118 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 CLYBLQ8N0X4 340 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 SLC43A2Q8N370 569 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 TRAM1L1Q8N609 369 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 ARFGAP2Q8N6H7 521 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 KLHDC1Q8N7A1 406 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 UBL4BQ8N7F7 174 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 SNX31Q8N9S9 440 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 JOSD2Q8TAC2 188 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 ADAMTS16Q8TE57 1224 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 PYROXD1Q8WU10 500 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 UBLCP1Q8WVY7 318 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 NSMCE2Q96MF7 247 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 TAAR6Q96RI8 345 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 TXN2Q99757 166 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 FRMD8P1Q9BZ68 369 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 CHRNA10Q9GZZ6 450 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 SRMSQ9H3Y6 488 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 TUBB1Q9H4B7 451 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 DHX35Q9H5Z1 703 aaKnown RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 MTHFD2LQ9H903 347 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 WDR54Q9H977 334 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 ETNK2Q9NVF9 386 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 HAO2Q9NYQ3 351 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 ADAM22Q9P0K1 906 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 FBXL4Q9UKA2 621 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 NXT1Q9UKK6 140 aaKnown RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 PPIEQ9UNP9 301 aaKnown RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 ERGIC3Q9Y282 383 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 ZNF835Q9Y2P0 537 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 IFT52Q9Y366 437 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 HEBP2Q9Y5Z4 205 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 NBEAL1Q6ZS30 2694 aa3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 NSD1Q96L73 2696 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P5-201ENST00000428894 FN1P02751 2386 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms