RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 GLI4P10075 376 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 NR2C1P13056 603 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ACADSP16219 412 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 CDKN2AP42771 156 aaKnown RBP7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 RPS7P62081 194 aaKnown RBP7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 FMODQ06828 376 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ITGADQ13349 1161 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 CAMK2DQ13557 499 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 MAD2L1BPQ15013 274 aaPredicted RBP7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 EIF2S3LQ2VIR3 472 aaKnown RBP7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 SEM1Q6ZVN7 128 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 USP51Q70EK9 711 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 CXXC5Q7LFL8 322 aaKnown RBP7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ATCAYQ86WG3 371 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 WDFY1Q8IWB7 410 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ENTHD1Q8IYW4 607 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 TMEM123Q8N131 208 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 UBE2J2Q8N2K1 259 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 GPR137CQ8N3F9 429 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZIC4Q8N9L1 334 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 PROKR2Q8NFJ6 384 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 OR2T4Q8NH00 348 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 HDAC2Q92769 488 aaKnown RBP7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 UBE2FQ969M7 185 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 TMEM45BQ96B21 275 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 LRR1Q96L50 414 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZFP3Q96NJ6 502 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ALKBH3Q96Q83 286 aaPredicted RBP7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 TTYH2Q9BSA4 534 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ALG12Q9BV10 488 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ULBP2Q9BZM5 246 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLCO5A1Q9H2Y9 848 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 MED20Q9H944 212 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 B3GAT2Q9NPZ5 323 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 RPRD1BQ9NQG5 326 aaKnown RBP7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 GLRX2Q9NS18 164 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 PARPBPQ9NWS1 579 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 CLN6Q9NWW5 311 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ASB6Q9NWX5 421 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF226Q9NYT6 803 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 ING1Q9UK53 422 aaPredicted RBP7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 MED12Q93074 2177 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC22A23A1A5C7 686 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 OR6C68A6NDL8 312 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 B8ZZF3 427 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 E9PLN8 166 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 E9PQ18 207 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 CCL21O00585 134 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC16A7O60669 478 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 TRMUO75648 421 aaKnown RBP7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 SMNDC1O75940 238 aaKnown RBP eCLIP7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF432O94892 652 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 IGHV3-9P01782 118 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 GYPBP06028 91 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 PGA4P0DJD7 388 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 PGA3P0DJD8 388 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 MYF6P23409 242 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 PYCR1P32322 319 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 CA7P43166 264 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 CENPAP49450 140 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 SNRPGP62308 76 aaKnown RBP7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 LGALS3BPQ08380 585 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 PMPCAQ10713 525 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 FOXF2Q12947 444 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 IGFBP7Q16270 282 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 KLHL12Q53G59 568 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 DNM1P34Q6PK57 102 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 NHLRC1Q6VVB1 395 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 NCCRP1Q6ZVX7 275 aaPredicted RBP7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 FAM214BQ7L5A3 538 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 NUFIP2Q7Z417 695 aaKnown RBP7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 BCDIN3DQ7Z5W3 292 aaKnown RBP7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 THAP5Q7Z6K1 395 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 CPOQ8IVL8 374 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 GID4Q8IVV7 300 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 C20orf196Q8IYI0 205 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF843Q8N446 348 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 MARVELD2Q8N4S9 558 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 NAXEQ8NCW5 288 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 GALNT11Q8NCW6 608 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 NPEPL1Q8NDH3 523 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 BBS1Q8NFJ9 593 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 OR6K6Q8NGW6 343 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 OR6K3Q8NGY3 331 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 CNIH3Q8TBE1 160 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 TRUB1Q8WWH5 349 aaKnown RBP7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 NSMAFQ92636 917 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 RBP7Q96R05 134 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 SNX18Q96RF0 628 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 KCNK17Q96T54 332 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 VKORC1Q9BQB6 163 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 SFXN3Q9BWM7 321 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 OR51V1Q9H2C8 321 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 HINT3Q9NQE9 182 aaKnown RBP7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 VSX1Q9NZR4 365 aaPredicted RBP7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 UPB1Q9UBR1 384 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 AASSQ9UDR5 926 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 LRCH1Q9Y2L9 728 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 MEMO1Q9Y316 297 aa7.01□□□□□ -1.29
HMGA1P4-201ENST00000428643 HSPE1-MOB4S4R3N1 261 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms