RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 CCDC54Q8NEL0 328 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 C7orf34Q96L11 122 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 USB1Q9BQ65 265 aaKnown RBP9.74□□□□□ -0.85
TCOF1-204ENST00000427724 B3GNT4Q9C0J1 378 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 TMEM38AQ9H6F2 299 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 DDX31Q9H8H2 851 aaKnown RBP9.74□□□□□ -0.85
TCOF1-204ENST00000427724 GYPBP06028 91 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 S1PR1P21453 382 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 MEOX1P50221 254 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 LRRC18Q8N456 261 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 ZC3H10Q96K80 434 aaKnown RBP9.74□□□□□ -0.85
TCOF1-204ENST00000427724 GNRHR2Q96P88 292 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 HCAR1Q9BXC0 346 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 NT5DC2Q9H857 520 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 PLCXD1Q9NUJ7 323 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 IL17BQ9UHF5 180 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 SLC7A11Q9UPY5 501 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 TMED7-TICAM2A0A0A6YYA0 188 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 A0A1W2PRQ8 180 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 GAPDHSO14556 408 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ARL6IP5O75915 188 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 TPPPO94811 219 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 C1QBP02746 253 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 TRHRP34981 398 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-204ENST00000427724 CLDN15P56746 228 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 AP3S2P59780 193 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 DCAF10Q5QP82 559 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ZNF813Q6ZN06 617 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ASCL5Q7RTU5 278 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ZBTB44Q8NCP5 570 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 OR6T1Q8NGN1 323 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 SPACA9Q96E40 222 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-204ENST00000427724 LMF2Q9BU23 707 aaKnown RBP9.73□□□□□ -0.85
TCOF1-204ENST00000427724 TMED7Q9Y3B3 224 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 CCL21O00585 134 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ARPC5O15511 151 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 IL1AP01583 271 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 CSN2P05814 226 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 FAM87AP0C7U9 286 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ERVK-25P63136 954 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 SLC35A1P78382 337 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 PITPNAQ00169 270 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 C4orf46Q504U0 113 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 OR2T4Q8NH00 348 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 TMEM239Q8WW34 195 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 PRRC1Q96M27 445 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 RNF32Q9H0A6 362 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 OBP2BQ9NPH6 170 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 KLHL9Q9P2J3 617 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 KLHL21Q9UJP4 597 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 WIF1Q9Y5W5 379 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 CKAP5Q14008 2032 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 A1L4Q6 167 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 P2RX6O15547 441 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 FCGR2AP12318 317 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 PPICP45877 212 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ATP1A1-AS1Q5TC04 95 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ALKAL2Q6UX46 152 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 GID4Q8IVV7 300 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ST6GAL2Q96JF0 529 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 OR10A4Q9H209 315 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 TREM1Q9NP99 234 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ATP23Q9Y6H3 246 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ANK1P16157 1881 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 A0A1W2PQM1 296 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 SLC19A2O60779 497 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 MTRF1O75570 445 aaKnown RBP9.73□□□□□ -0.85
TCOF1-204ENST00000427724 GATBO75879 557 aaKnown RBP9.73□□□□□ -0.85
TCOF1-204ENST00000427724 NDUFB2O95178 105 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 PPP1R3DO95685 299 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 CD3GP09693 182 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 FAUP35544 74 aaKnown RBP9.73□□□□□ -0.85
TCOF1-204ENST00000427724 NHLH1Q02575 133 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 RAB40BQ12829 278 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 CLVS2Q5SYC1 327 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 MFSD12Q6NUT3 480 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 MRGPREQ86SM8 312 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 D2HGDHQ8N465 521 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 OR5J2Q8NH18 312 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 ANGPTL6Q8NI99 470 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 NUDT9Q9BW91 350 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 HES7Q9BYE0 225 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 SEMA4CQ9C0C4 833 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 IER3IP1Q9Y5U9 82 aa9.73□□□□□ -0.85
TCOF1-204ENST00000427724 TRBV5-3A0A0A0MS03 114 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 B4E171 279 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 ZNF587BE7ETH6 402 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 RAB3BP20337 219 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 GIFP27352 417 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 TSPAN7P41732 249 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 DUSP5Q16690 384 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 LRRC37A5PQ49AS3 106 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 RAB12Q6IQ22 244 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 ARHGAP11AQ6P4F7 1023 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 FAM198BQ6UWH4 519 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 DNAAF1Q8NEP3 725 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 ZMYND19Q96E35 227 aaPredicted RBP9.72□□□□□ -0.85
TCOF1-204ENST00000427724 FAM173AQ9BQD7 235 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 CRLF2Q9HC73 371 aa9.72□□□□□ -0.85
TCOF1-204ENST00000427724 KCNJ16Q9NPI9 418 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms