RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PTDSS2Q9BVG9 487 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 EGLN1Q9GZT9 426 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 NKIRAS2Q9NYR9 191 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TESQ9UGI8 421 aaKnown RBP10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HAO1Q9UJM8 370 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CORO2BQ9UQ03 480 aa10.53□□□□□ -0.72
HLA-DQB3-203ENST00000425319 NBEAL1Q6ZS30 2694 aa10.52□□□□□ -0.72
HLA-DQB3-203ENST00000425319 IGHV1-69-2A0A0G2JMI3 117 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 A0A1B0GWA3 101 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 C17orf100A8MU93 164 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 EVPLLA8MZ36 301 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MS4A18H0YCH9 400 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 WIPF1O43516 503 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CDC14BO60729 498 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SERPINI2O75830 405 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ADORA3P0DMS8 318 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 KITP10721 976 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NAT2P11245 290 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 B4GALT1P15291 398 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 EGR1P18146 543 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC6A2P23975 617 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 EPHA3P29320 983 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 APLNRP35414 380 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 LIPAP38571 399 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 GUCA1AP43080 201 aaPredicted RBP10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CRYBB2P43320 205 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZNF84P51523 738 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 AQP5P55064 265 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 RGS8P57771 180 aaPredicted RBP10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 HOXC5Q00444 222 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MS4A18Q3C1V0 323 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CEP85LQ5SZL2 805 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 REEP3Q6NUK4 255 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 TMEM123Q8N131 208 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ICA1LQ8NDH6 482 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC30A7Q8NEW0 376 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZNF566Q969W8 418 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZNF837Q96EG3 531 aaPredicted RBP10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ELMOD3Q96FG2 381 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MS4A3Q96HJ5 214 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SORT1Q99523 831 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 RACGAP1Q9H0H5 632 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 WDR55Q9H6Y2 383 aaPredicted RBP10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 C7orf69Q9H7B7 122 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 A4GALTQ9NPC4 353 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MRPL39Q9NYK5 338 aaKnown RBP10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 B3GAT1Q9P2W7 334 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 FZR1Q9UM11 496 aa10.52□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SDHDO14521 159 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 TRAF3IP2O43734 574 aaPredicted RBP10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ALDOCP09972 364 aaKnown RBP10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 IL12AP29459 219 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 LMO4P61968 165 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CCL8P80075 99 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MAD2L1BPQ15013 274 aaPredicted RBP10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 FXNQ16595 210 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SWT1Q5T5J6 900 aaKnown RBP10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 TTC33Q6PID6 262 aaPredicted RBP10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 DHRS4L2Q6PKH6 230 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC16A14Q7RTX9 510 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 HDDC2Q7Z4H3 204 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 C1QL2Q7Z5L3 287 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MYPOPQ86VE0 399 aaPredicted RBP10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC22A24Q8N4F4 322 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 OR5J2Q8NH18 312 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC41A3Q96GZ6 507 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 GAL3ST1Q99999 423 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC19A3Q9BZV2 496 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 C20orf27Q9GZN8 174 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZMAT3Q9HA38 289 aaKnown RBP10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CYSLTR2Q9NS75 346 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MED29Q9NX70 200 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 GLTPQ9NZD2 209 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 KLHL14Q9P2G3 628 aa10.51□□□□□ -0.73
HLA-DQB3-203ENST00000425319 LOC105371242A0A075B767 164 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ISPDA4D126 451 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 C11orf98E9PRG8 122 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 RNF13O43567 381 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PLPP2O43688 288 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 FOXH1O75593 365 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 FAM157BP0CG42 384 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NR2C1P13056 603 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ARFIP2P53365 341 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 UCP2P55851 309 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 BIDP55957 195 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CDK6Q00534 326 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 HSF2Q03933 536 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 BST1Q10588 318 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 OR1Q1Q15612 314 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MAPK11Q15759 364 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ALKBH6Q3KRA9 238 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZNF718Q3SXZ3 478 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZMAT1Q5H9K5 638 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 GCNT6Q5T4J0 391 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ARL9Q6T311 187 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 LRP11Q86VZ4 500 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SKA3Q8IX90 412 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 RBM15BQ8NDT2 890 aaKnown RBP10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 HIPK4Q8NE63 616 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 OR6X1Q8NH79 312 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms