RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 GSG1Q2KHT4 349 aa18.65■□□□□ 0.58
CDCP1-202ENST00000425231 PRIMA1Q86XR5 153 aa18.65■□□□□ 0.58
CDCP1-202ENST00000425231 SLC15A3Q8IY34 581 aa18.65■□□□□ 0.58
CDCP1-202ENST00000425231 IL17RDQ8NFM7 739 aa18.65■□□□□ 0.58
CDCP1-202ENST00000425231 FAM168AQ92567 244 aa18.65■□□□□ 0.58
CDCP1-202ENST00000425231 SORCS2Q96PQ0 1159 aa18.65■□□□□ 0.58
CDCP1-202ENST00000425231 PLK3Q9H4B4 646 aa18.65■□□□□ 0.58
CDCP1-202ENST00000425231 C20orf141Q9NUB4 165 aa18.65■□□□□ 0.58
CDCP1-202ENST00000425231 GMPR2Q9P2T1 348 aaKnown RBP18.65■□□□□ 0.58
CDCP1-202ENST00000425231 BLOC1S5-TXNDC5H3BN57 136 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 PGA4P0DJD7 388 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 PGA3P0DJD8 388 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 THRBP10828 461 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 COX4I1P13073 169 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 ZNF14P17017 642 aaPredicted RBP18.64■□□□□ 0.57
CDCP1-202ENST00000425231 FUT1P19526 365 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 PIWIL3Q7Z3Z3 882 aaKnown RBP18.64■□□□□ 0.57
CDCP1-202ENST00000425231 NANOGNBQ7Z5D8 188 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 C10orf105Q8TEF2 133 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 TMEM239Q8WW34 195 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 LIPHQ8WWY8 451 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 ZNF566Q969W8 418 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 MS4A3Q96HJ5 214 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 TPD52L3Q96J77 140 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 JMJD1CQ15652 2540 aa18.64■□□□□ 0.57
CDCP1-202ENST00000425231 YLPM1P49750 1951 aaKnown RBP18.63■□□□□ 0.57
CDCP1-202ENST00000425231 SONP18583 2426 aaKnown RBP18.63■□□□□ 0.57
CDCP1-202ENST00000425231 ABCA2Q9BZC7 2435 aa18.63■□□□□ 0.57
CDCP1-202ENST00000425231 CD5LO43866 347 aa18.63■□□□□ 0.57
CDCP1-202ENST00000425231 CCDC22O60826 627 aa18.63■□□□□ 0.57
CDCP1-202ENST00000425231 OR7A10O76100 309 aa18.63■□□□□ 0.57
CDCP1-202ENST00000425231 TSPAN19P0C672 248 aa18.63■□□□□ 0.57
CDCP1-202ENST00000425231 RPL18Q07020 188 aaKnown RBP18.63■□□□□ 0.57
CDCP1-202ENST00000425231 C8orf82Q6P1X6 216 aaPredicted RBP18.63■□□□□ 0.57
CDCP1-202ENST00000425231 SKA3Q8IX90 412 aa18.63■□□□□ 0.57
CDCP1-202ENST00000425231 A4GNTQ9UNA3 340 aa18.63■□□□□ 0.57
CDCP1-202ENST00000425231 AP3M1Q9Y2T2 418 aa18.63■□□□□ 0.57
CDCP1-202ENST00000425231 TMEM129A0AVI4 362 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 BCL10O95999 233 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 TP53P04637 393 aaPredicted RBP18.62■□□□□ 0.57
CDCP1-202ENST00000425231 F13BP05160 661 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 ZNF35P13682 527 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 SLC25A16P16260 332 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 RAB1AP62820 205 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 RUNX1T1Q06455 604 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 LOXL1Q08397 574 aaPredicted RBP18.62■□□□□ 0.57
CDCP1-202ENST00000425231 HIST3H3Q16695 136 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 ARPINQ7Z6K5 226 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 TREML1Q86YW5 311 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 FGFBP3Q8TAT2 258 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 SGTBQ96EQ0 304 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 TNFRSF13CQ96RJ3 184 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 DOK1Q99704 481 aa18.62■□□□□ 0.57
CDCP1-202ENST00000425231 MRPL13Q9BYD1 178 aaKnown RBP18.62■□□□□ 0.57
CDCP1-202ENST00000425231 DENND2DQ9H6A0 471 aaPredicted RBP18.62■□□□□ 0.57
CDCP1-202ENST00000425231 DHHO43323 396 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 TLX2O43763 284 aaPredicted RBP18.61■□□□□ 0.57
CDCP1-202ENST00000425231 CRLF1O75462 422 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 CSF3P09919 207 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 NPR2P20594 1047 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 FUT4P22083 530 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 NR4A1P22736 598 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 AQP2P41181 271 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 GIPRP48546 466 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 PTDSS1P48651 473 aaKnown RBP18.61■□□□□ 0.57
CDCP1-202ENST00000425231 LIPEQ05469 1076 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 DAG1Q14118 895 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 SLC22A24Q8N4F4 322 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 ANKS4BQ8N8V4 417 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 SEPHS2Q99611 448 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 VRK1Q99986 396 aaPredicted RBP18.61■□□□□ 0.57
CDCP1-202ENST00000425231 HOPXQ9BPY8 73 aaPredicted RBP18.61■□□□□ 0.57
CDCP1-202ENST00000425231 ADAM21Q9UKJ8 722 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 MED31Q9Y3C7 131 aa18.61■□□□□ 0.57
CDCP1-202ENST00000425231 NME4O00746 187 aa18.6■□□□□ 0.57
CDCP1-202ENST00000425231 QDPRP09417 244 aa18.6■□□□□ 0.57
CDCP1-202ENST00000425231 PATE4P0C8F1 98 aa18.6■□□□□ 0.57
CDCP1-202ENST00000425231 PPOXP50336 477 aa18.6■□□□□ 0.57
CDCP1-202ENST00000425231 LSM11P83369 360 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDCP1-202ENST00000425231 ST3GAL3Q11203 375 aa18.6■□□□□ 0.57
CDCP1-202ENST00000425231 SNTB2Q13425 540 aaKnown RBP18.6■□□□□ 0.57
CDCP1-202ENST00000425231 KRT80Q6KB66 452 aa18.6■□□□□ 0.57
CDCP1-202ENST00000425231 PRRC1Q96M27 445 aa18.6■□□□□ 0.57
CDCP1-202ENST00000425231 EFCAB1Q9HAE3 211 aa18.6■□□□□ 0.57
CDCP1-202ENST00000425231 TMEM38BQ9NVV0 291 aa18.6■□□□□ 0.57
CDCP1-202ENST00000425231 SNX13Q9Y5W8 968 aa18.6■□□□□ 0.57
CDCP1-202ENST00000425231 FKBP7Q9Y680 259 aa18.6■□□□□ 0.57
CDCP1-202ENST00000425231 CHD3Q12873 2000 aaKnown RBP18.6■□□□□ 0.57
CDCP1-202ENST00000425231 A0A1W2PRG6 482 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 VSTM5A8MXK1 200 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 VWC2LB2RUY7 222 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 hCG_2039718K7EN88 272 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 ATP8B1O43520 1251 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 PIP5K1CO60331 668 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 UBL3O95164 117 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 IGHG1P01857 330 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 IGFBP1P08833 259 aaPredicted RBP18.59■□□□□ 0.57
CDCP1-202ENST00000425231 OR8G3PP0DMU2 310 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 SLC7A2P52569 658 aa18.59■□□□□ 0.57
CDCP1-202ENST00000425231 LAPTM4AQ15012 233 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms