RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 MS4A3Q96HJ5 214 aa13.41□□□□□ -0.26
SPC24-201ENST00000423327 PRRC1Q96M27 445 aa13.41□□□□□ -0.26
SPC24-201ENST00000423327 REG4Q9BYZ8 158 aa13.41□□□□□ -0.26
SPC24-201ENST00000423327 BARX1Q9HBU1 254 aaPredicted RBP13.41□□□□□ -0.26
SPC24-201ENST00000423327 GLTPQ9NZD2 209 aa13.41□□□□□ -0.26
SPC24-201ENST00000423327 ABCD2Q9UBJ2 740 aa13.41□□□□□ -0.26
SPC24-201ENST00000423327 CHD3Q12873 2000 aaKnown RBP13.4□□□□□ -0.26
SPC24-201ENST00000423327 YLPM1P49750 1951 aaKnown RBP13.4□□□□□ -0.26
SPC24-201ENST00000423327 ZNF726A6NNF4 738 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 CXCR6O00574 342 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 SNX3O60493 162 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 PRSS23O95084 383 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 CRYAAP02489 173 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 ZNF14P17017 642 aaPredicted RBP13.4□□□□□ -0.26
SPC24-201ENST00000423327 PAX7P23759 505 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 ARR3P36575 388 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 AQP2P41181 271 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 YAP1P46937 504 aaKnown RBP13.4□□□□□ -0.26
SPC24-201ENST00000423327 NUDT6P53370 316 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 GYS2P54840 703 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 CBLL1Q75N03 491 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 ZNF525Q8N782 197 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 RBM15BQ8NDT2 890 aaKnown RBP13.4□□□□□ -0.26
SPC24-201ENST00000423327 NUP37Q8NFH4 326 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 SGTBQ96EQ0 304 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 ADAD1Q96M93 576 aaKnown RBP13.4□□□□□ -0.26
SPC24-201ENST00000423327 SORCS2Q96PQ0 1159 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 SEPHS2Q99611 448 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 FAM107BQ9H098 131 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 B3GAT2Q9NPZ5 323 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 POFUT2Q9Y2G5 429 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 RTTNQ86VV8 2226 aa13.4□□□□□ -0.26
SPC24-201ENST00000423327 INAFM1C9JVW0 142 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 BLOC1S5-TXNDC5H3BN57 136 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 OR6A2O95222 327 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 PATE4P0C8F1 98 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 THRBP10828 461 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 NCK1P16333 377 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 LSP1P33241 339 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 CAPZA2P47755 286 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 FHL1Q13642 323 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 HIST3H3Q16695 136 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 VHLLQ6RSH7 139 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 MEX3DQ86XN8 651 aaKnown RBP13.39□□□□□ -0.27
SPC24-201ENST00000423327 ZNF584Q8IVC4 421 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 CCDC36Q8IYA8 594 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 OFCC1Q8IZS5 231 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 NOXO1Q8NFA2 376 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 ASB10Q8WXI3 467 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 NANOS1Q8WY41 292 aaKnown RBP13.39□□□□□ -0.27
SPC24-201ENST00000423327 ZNF566Q969W8 418 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 SLC25A44Q96H78 314 aaPredicted RBP13.39□□□□□ -0.27
SPC24-201ENST00000423327 HSH2DQ96JZ2 352 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 ZNF347Q96SE7 839 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 HOPXQ9BPY8 73 aaPredicted RBP13.39□□□□□ -0.27
SPC24-201ENST00000423327 KCNS3Q9BQ31 491 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 MRPL13Q9BYD1 178 aaKnown RBP13.39□□□□□ -0.27
SPC24-201ENST00000423327 MOV10Q9HCE1 1003 aaKnown RBP13.39□□□□□ -0.27
SPC24-201ENST00000423327 RHCGQ9UBD6 479 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 AP3M1Q9Y2T2 418 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 JMJD1CQ15652 2540 aa13.39□□□□□ -0.27
SPC24-201ENST00000423327 IGKV1D-43A0A0B4J1Z2 117 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 TMEM129A0AVI4 362 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 DHHO43323 396 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 PDE5AO76074 875 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 BCL10O95999 233 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 SERPINA1P01009 418 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 IGFBP1P08833 259 aaPredicted RBP13.38□□□□□ -0.27
SPC24-201ENST00000423327 OR4A8P0C604 315 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 CD79AP11912 226 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 MAKP20794 623 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 THBS4P35443 961 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 SERPINF1P36955 418 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 PSME3P61289 254 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 MYBPC1Q00872 1141 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 PIGFQ07326 219 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 RAB35Q15286 201 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 EFNB3Q15768 340 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 GSG1Q2KHT4 349 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 ARMC4Q5T2S8 1044 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 SKA3Q8IX90 412 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 OR4F15Q8NGB8 312 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 NMD3Q96D46 503 aaKnown RBP13.38□□□□□ -0.27
SPC24-201ENST00000423327 PLK3Q9H4B4 646 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 ZNF442Q9H7R0 627 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 EFCAB1Q9HAE3 211 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 TMEM38BQ9NVV0 291 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 MED31Q9Y3C7 131 aa13.38□□□□□ -0.27
SPC24-201ENST00000423327 DNHD1Q96M86 4753 aa13.37□□□□□ -0.27
SPC24-201ENST00000423327 GPRIN2O60269 458 aa13.37□□□□□ -0.27
SPC24-201ENST00000423327 TRMUO75648 421 aaKnown RBP13.37□□□□□ -0.27
SPC24-201ENST00000423327 ZNF682O95780 498 aa13.37□□□□□ -0.27
SPC24-201ENST00000423327 HIST1H2ABP04908 130 aa13.37□□□□□ -0.27
SPC24-201ENST00000423327 QDPRP09417 244 aa13.37□□□□□ -0.27
SPC24-201ENST00000423327 ZNF35P13682 527 aa13.37□□□□□ -0.27
SPC24-201ENST00000423327 PCSK6P29122 969 aa13.37□□□□□ -0.27
SPC24-201ENST00000423327 PRDX6P30041 224 aa13.37□□□□□ -0.27
SPC24-201ENST00000423327 GIPRP48546 466 aa13.37□□□□□ -0.27
SPC24-201ENST00000423327 PTDSS1P48651 473 aaKnown RBP13.37□□□□□ -0.27
SPC24-201ENST00000423327 ZNF133P52736 654 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms