RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 ATG10Q9H0Y0 220 aa1.32□□□□□ -2.2
UBE2W-202ENST00000422906 MUC13Q9H3R2 512 aa1.32□□□□□ -2.2
UBE2W-202ENST00000422906 GPR35Q9HC97 309 aa1.32□□□□□ -2.2
UBE2W-202ENST00000422906 FAM114A2Q9NRY5 505 aa1.32□□□□□ -2.2
UBE2W-202ENST00000422906 TBCCD1Q9NVR7 557 aa1.32□□□□□ -2.2
UBE2W-202ENST00000422906 TAS2R5Q9NYW4 299 aa1.32□□□□□ -2.2
UBE2W-202ENST00000422906 IL19Q9UHD0 177 aa1.32□□□□□ -2.2
UBE2W-202ENST00000422906 TSSC4Q9Y5U2 329 aaPredicted RBP1.32□□□□□ -2.2
UBE2W-202ENST00000422906 PHYHO14832 338 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 EIF4E2O60573 245 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DNAJC8O75937 253 aaPredicted RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 UTS2O95399 124 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 HSPA4LO95757 839 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 PF4P02776 101 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 SERPING1P05155 500 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 EIF2S1P05198 315 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 FKBP2P26885 142 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 P2RX1P51575 399 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 UBASH3AP57075 661 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 RPL23AP62750 156 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 MRPS22P82650 360 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 SLC3A1Q07837 685 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 C2orf54Q08AI8 447 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 CDH17Q12864 832 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 SLC29A2Q14542 456 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 RAB35Q15286 201 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DEFB121Q5J5C9 76 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 SLC25A47Q6Q0C1 308 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 PAQR6Q6TCH4 344 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 FIP1L1Q6UN15 594 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 KCTD20Q7Z5Y7 419 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 NET1Q7Z628 596 aaPredicted RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 GPR180Q86V85 440 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 RNF130Q86XS8 419 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 RCOR2Q8IZ40 523 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ZCCHC24Q8N2G6 241 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 OR9K2Q8NGE7 335 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 OR10Q1Q8NGQ4 319 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 OR2T11Q8NH01 316 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DOK4Q8TEW6 326 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 WDR60Q8WVS4 1066 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 VPS39Q96JC1 886 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ARL5BQ96KC2 179 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DHRS1Q96LJ7 313 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 CRACR2AQ9BSW2 395 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ACPTQ9BZG2 426 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 TRIM5Q9C035 493 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 VCXQ9H320 206 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 VCX3BQ9H321 246 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 NCOR1P1Q9H4R4 102 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 VCX3AQ9NNX9 186 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 HOMER3Q9NSC5 361 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 PTTG2Q9NZH5 202 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 CAMK2AQ9UQM7 478 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 TCF19Q9Y242 345 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 HDGFL3Q9Y3E1 203 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 A0A1B0GW55 424 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 EFCAB8A8MWE9 144 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 OR1F1O43749 312 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 SKAP2O75563 359 aaPredicted RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 CRYGBP07316 175 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DUX4L2P0CJ85 424 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DUX4L3P0CJ86 424 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DUX4L4P0CJ87 422 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DUX4L5P0CJ88 424 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DUX4L6P0CJ89 424 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DUX4L7P0CJ90 424 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 HSD3B1P14060 373 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 COMTP21964 271 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 HTR2AP28223 471 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 KRT9P35527 623 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 MASP1P48740 699 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ARL4DP49703 201 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DIO1P49895 249 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ZP1P60852 638 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 MT1HP80294 61 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 SF1Q15637 639 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 FBXO48Q5FWF7 155 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DUX4L9Q6RFH8 374 aaPredicted RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 NDUFAF2Q8N183 169 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 FGFRL1Q8N441 504 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 TEX9Q8N6V9 391 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 PCYOX1LQ8NBM8 494 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 C4orf3Q8WVX3 66 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 RAB40AQ8WXH6 277 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 LHX4Q969G2 390 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 TSPAN17Q96FV3 270 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 SH3GL3Q99963 347 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 FERMT1Q9BQL6 677 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 PAIP1Q9H074 479 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 NUP62CLQ9H1M0 184 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 OSGEPL1Q9H4B0 414 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 MARCH7Q9H992 704 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 RRAGDQ9NQL2 400 aaPredicted RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 KIF17Q9P2E2 1029 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DUX4Q9UBX2 424 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 SYNJ2BP-COX16A0A087WUM0 186 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 CDHR4A6H8M9 788 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 H3BQV1 296 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 IFRD1O00458 451 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms