RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 NPIPA5E9PKD4 350 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 GPR171O14626 319 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 RGS10O43665 173 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 AKAP8O43823 692 aaKnown RBP12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 CXCL13O43927 109 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 FAM20BO75063 409 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 ZNF432O94892 652 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 RENP00797 406 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 OPN1LWP04000 364 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 JUNBP17275 347 aaPredicted RBP12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 ACVR1BP36896 505 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 EIF1AXP47813 144 aaKnown RBP12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 NR1H2P55055 460 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 PMP22Q01453 160 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 IRF3Q14653 427 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 PON3Q15166 354 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 RNPS1Q15287 305 aaKnown RBP12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 SF3B4Q15427 424 aaKnown RBP eCLIP12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 STK11Q15831 433 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 THEM4Q5T1C6 240 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 LCN1P1Q5VSP4 162 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 GTF2IRD2BQ6EKJ0 949 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 LEG1Q6P5S2 330 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 GTF2IRD2Q86UP8 949 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 SPARTQ8N0X7 666 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 ZIC4Q8N9L1 334 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 POMGNT2Q8NAT1 580 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 SDR9C7Q8NEX9 313 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 SMPDL3BQ92485 455 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 GPR137Q96N19 417 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 HCAR1Q9BXC0 346 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 RACGAP1Q9H0H5 632 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 MARCH7Q9H992 704 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 BCO1Q9HAY6 547 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 BATF3Q9NR55 127 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 INPP5EQ9NRR6 644 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 MCTS1Q9ULC4 181 aaKnown RBP12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 NPIPA1Q9UND3 350 aa12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 DIMT1Q9UNQ2 313 aaKnown RBP12.7□□□□□ -0.38
SHMT1P1-201ENST00000419974 AHRRA9YTQ3 701 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 H0YC42 278 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 ARHGEF9O43307 516 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 GLCEO94923 617 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 FADS2O95864 444 aaKnown RBP12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 CLPTM1O96005 669 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 IGHA1P01876 353 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 TFAP2AP05549 437 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 PGA4P0DJD7 388 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 PGA3P0DJD8 388 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 FCGR2AP12318 317 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 SPI1P17947 270 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 ST3GAL4Q11206 333 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 C1DQ13901 141 aaKnown RBP12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 TBCEQ15813 527 aaPredicted RBP12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 LINC01590Q5TEZ4 76 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 FCRLAQ7L513 359 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 LSRQ86X29 649 aaPredicted RBP12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 OR6V1Q8N148 313 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 KDM8Q8N371 416 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 Q8NA96 180 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 TMEM80Q96HE8 168 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 MNTQ99583 582 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 GLRX2Q9NS18 164 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 KLHL9Q9P2J3 617 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 ING1Q9UK53 422 aaPredicted RBP12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 FLVCR1Q9Y5Y0 555 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 MPDZO75970 2070 aa12.69□□□□□ -0.38
SHMT1P1-201ENST00000419974 OR6C65A6NJZ3 312 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 FAM183AA6NL82 134 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 PTGES3LE9PB15 166 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 RAMP1O60894 148 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 TRMUO75648 421 aaKnown RBP12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 SYNGR4O95473 234 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 IGHG1P01857 330 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 HOXD4P09016 255 aaPredicted RBP12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 PCMT1P22061 227 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 EEF1B2P24534 225 aaKnown RBP12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 PTGS2P35354 604 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 PTGER4P35408 488 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 RPL5P46777 297 aaKnown RBP12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 ALDH3B2P48448 385 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 MLLT10P55197 1068 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 RIPPLY2Q5TAB7 128 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 TMEM154Q6P9G4 183 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 DNM1P34Q6PK57 102 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 BCDIN3DQ7Z5W3 292 aaKnown RBP12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 TMEM123Q8N131 208 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 GHDCQ8N2G8 530 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 SVOPQ8N4V2 548 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 CYB561A3Q8NBI2 242 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 BBS1Q8NFJ9 593 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 FCGR1BQ92637 280 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 LGALS12Q96DT0 336 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 TUBA1CQ9BQE3 449 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 ASB6Q9NWX5 421 aa12.68□□□□□ -0.38
SHMT1P1-201ENST00000419974 IGLV1-36A0A0B4J1U3 117 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 NPIPA2E9PIF3 369 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 NPIPA3F8WFD2 350 aa12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 SMNDC1O75940 238 aaKnown RBP eCLIP12.67□□□□□ -0.38
SHMT1P1-201ENST00000419974 HRGP04196 525 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms