RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 OR1F2PQ96R84 312 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 EVA1AQ9H8M9 152 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 UBQLN4Q9NRR5 601 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 KCNG2Q9UJ96 466 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 HS3ST3A1Q9Y663 406 aa13.14□□□□□ -0.31
HDAC9-208ENST00000417496 A0A1B0GUH1 482 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 OR4C45A6NMZ5 311 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 PYCARD-AS1I3L0S3 204 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 IFNA7P01567 189 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 CENPAP49450 140 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 PSMD4P55036 377 aaKnown RBP13.13□□□□□ -0.31
HDAC9-208ENST00000417496 GFERP55789 205 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 AP3S2P59780 193 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 IGLV3-21P80748 117 aaPredicted RBP13.13□□□□□ -0.31
HDAC9-208ENST00000417496 OR5M10Q6IEU7 315 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 LRRN1Q6UXK5 716 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 BIVMQ86UB2 503 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 CDC20BQ86Y33 519 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 PTPMT1Q8WUK0 201 aaPredicted RBP13.13□□□□□ -0.31
HDAC9-208ENST00000417496 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.13□□□□□ -0.31
HDAC9-208ENST00000417496 CMTM3Q96MX0 182 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 GAL3ST4Q96RP7 486 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 SLITRK2Q9H156 845 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 PTTG3PQ9NZH4 202 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 AKAP7Q9P0M2 348 aaPredicted RBP13.13□□□□□ -0.31
HDAC9-208ENST00000417496 UBQLN2Q9UHD9 624 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 GTF2A1LQ9UNN4 478 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 OR5K4A6NMS3 321 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 SCDO00767 359 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 DOK2O60496 412 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 KDM4BO94953 1096 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 UTS2O95399 124 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 OR1D4P47884 311 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 PSMA6P60900 246 aaKnown RBP13.13□□□□□ -0.31
HDAC9-208ENST00000417496 HTR4Q13639 388 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 CSRP2Q16527 193 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.13□□□□□ -0.31
HDAC9-208ENST00000417496 ISXQ2M1V0 245 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 C2orf68Q2NKX9 166 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 PCGF3Q3KNV8 242 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 SFRP5Q5T4F7 317 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 FNDC7Q5VTL7 733 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 SLC6A19Q695T7 634 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 Q6ZS52 159 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 SLC25A36Q96CQ1 311 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 ELMOD3Q96FG2 381 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
HDAC9-208ENST00000417496 LRRC61Q9BV99 259 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 SLC19A3Q9BZV2 496 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 DIABLOQ9NR28 239 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 SOHLH2Q9NX45 425 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 CD207Q9UJ71 328 aa13.13□□□□□ -0.31
HDAC9-208ENST00000417496 ZNF264O43296 627 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 HLA-DQA2P01906 255 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 RAB40ALP0C0E4 278 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 VSIG10L2P0DP72 767 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 PNMTP11086 282 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 POU3F2P20265 443 aaPredicted RBP13.12□□□□□ -0.31
HDAC9-208ENST00000417496 ALOX5APP20292 161 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 NUDT1P36639 197 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 AP2S1P53680 142 aaPredicted RBP13.12□□□□□ -0.31
HDAC9-208ENST00000417496 RAB40AQ8WXH6 277 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 TSLPQ969D9 159 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 TGM7Q96PF1 710 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 GMEB2Q9UKD1 530 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 SLC22A13Q9Y226 551 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 SLC6A5Q9Y345 797 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 RNF215Q9Y6U7 377 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 IGHV5-51A0A0C4DH38 117 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 TRBV5-5A0A0J9YX44 114 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 ACOT7O00154 380 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 ICOSLGO75144 302 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 NSA2O95478 260 aaKnown RBP13.12□□□□□ -0.31
HDAC9-208ENST00000417496 GUSBP08236 651 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 CALCBP10092 127 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 CD1CP29017 333 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 SLC25A1P53007 311 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 DMWDQ09019 674 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 ELFN2Q5R3F8 820 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 FAM198BQ6UWH4 519 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 TMEM184AQ6ZMB5 413 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 PRSS58Q8IYP2 241 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 FAM71CQ8NEG0 241 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 OR5M1Q8NGP8 315 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 OR8S1Q8NH09 359 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 DVL3Q92997 716 aaPredicted RBP13.12□□□□□ -0.31
HDAC9-208ENST00000417496 SFXN2Q96NB2 322 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 ZNF224Q9NZL3 707 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 AUP1Q9Y679 476 aa13.12□□□□□ -0.31
HDAC9-208ENST00000417496 TEX46H3BTG2 121 aa13.11□□□□□ -0.31
HDAC9-208ENST00000417496 SHOXO15266 292 aa13.11□□□□□ -0.31
HDAC9-208ENST00000417496 HCRTR2O43614 444 aa13.11□□□□□ -0.31
HDAC9-208ENST00000417496 SRPX2O60687 465 aaPredicted RBP13.11□□□□□ -0.31
HDAC9-208ENST00000417496 GLSO94925 669 aaPredicted RBP13.11□□□□□ -0.31
HDAC9-208ENST00000417496 RLN1P04808 185 aa13.11□□□□□ -0.31
HDAC9-208ENST00000417496 ITGA5P08648 1049 aa13.11□□□□□ -0.31
HDAC9-208ENST00000417496 CCKBRP32239 447 aa13.11□□□□□ -0.31
HDAC9-208ENST00000417496 SLC37A1P57057 533 aa13.11□□□□□ -0.31
HDAC9-208ENST00000417496 OPCMLQ14982 345 aa13.11□□□□□ -0.31
HDAC9-208ENST00000417496 ETFDHQ16134 617 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms