RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 UBE2J2Q8N2K1 259 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 KISS1RQ969F8 398 aaPredicted RBP15.68■□□□□ 0.1
VCP-202ENST00000417448 TXNDC15Q96J42 360 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 ASPNQ9BXN1 380 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 NMNAT1Q9HAN9 279 aaPredicted RBP15.68■□□□□ 0.1
VCP-202ENST00000417448 GP6Q9HCN6 339 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 CBLN4Q9NTU7 201 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 B3GAT1Q9P2W7 334 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 ARFGEF3Q5TH69 2177 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 PLPP3O14495 311 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 GPR171O14626 319 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 ACOT8O14734 319 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 MRPL33O75394 65 aaKnown RBP15.67■□□□□ 0.1
VCP-202ENST00000417448 IFI30P13284 250 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 MAKP20794 623 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 AHCYP23526 432 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 SELENOPP49908 381 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 CLDN17P56750 224 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 RAB35Q15286 201 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 DNAL1Q4LDG9 190 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 LCN8Q6JVE9 175 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 C5orf46Q6UWT4 87 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 AAED1Q7RTV5 226 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 CYP4Z1Q86W10 505 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 RFLNBQ8N5W9 214 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 SGTBQ96EQ0 304 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 OXGR1Q96P68 337 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 EMC6Q9BV81 110 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 POLR2J2Q9GZM3 115 aaKnown RBP15.67■□□□□ 0.1
VCP-202ENST00000417448 POLR2J3Q9H1A7 115 aaKnown RBP15.67■□□□□ 0.1
VCP-202ENST00000417448 RASD1Q9Y272 281 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 MED31Q9Y3C7 131 aa15.67■□□□□ 0.1
VCP-202ENST00000417448 FAM32AQ9Y421 112 aaKnown RBP15.67■□□□□ 0.1
VCP-202ENST00000417448 A0A087WUU8 490 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 TRBV4-1A0A0J9YWV2 114 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 VWC2LB2RUY7 222 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 LYZL6O75951 148 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 OR7A10O76100 309 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 ADORA3P0DMS8 318 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 HNF1AP20823 631 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 SPOCK1Q08629 439 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 PPP1R8Q12972 351 aaKnown RBP15.66■□□□□ 0.1
VCP-202ENST00000417448 C1DQ13901 141 aaKnown RBP15.66■□□□□ 0.1
VCP-202ENST00000417448 SEC23BQ15437 767 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 FGD3Q5JSP0 725 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 TSPO2Q5TGU0 170 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 CARD17Q5XLA6 110 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 NIPAL3Q6P499 406 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 BHLHA15Q7RTS1 189 aaPredicted RBP15.66■□□□□ 0.1
VCP-202ENST00000417448 ZDHHC21Q8IVQ6 265 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 NRMQ8IXM6 262 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 PIK3C3Q8NEB9 887 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 OR5J2Q8NH18 312 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 OR6S1Q8NH40 331 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 APH1AQ96BI3 265 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 NANSQ9NR45 359 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 SLC7A10Q9NS82 523 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 MED29Q9NX70 200 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 MRPL39Q9NYK5 338 aaKnown RBP15.66■□□□□ 0.1
VCP-202ENST00000417448 TAS2R5Q9NYW4 299 aa15.66■□□□□ 0.1
VCP-202ENST00000417448 HEATR1Q9H583 2144 aaKnown RBP15.65■□□□□ 0.1
VCP-202ENST00000417448 BLOC1S5-TXNDC5H3BN57 136 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 H7C417 338 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 FZD7O75084 574 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 HIST1H2ABP04908 130 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 FABP3P05413 133 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 H1F0P07305 194 aaKnown RBP15.65■□□□□ 0.1
VCP-202ENST00000417448 THRBP10828 461 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 ZNF43P17038 809 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 RHCEP18577 417 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 IFNA8P32881 189 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 RBM34P42696 430 aaKnown RBP15.65■□□□□ 0.1
VCP-202ENST00000417448 GPR4P46093 362 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 SPIBQ01892 262 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 POU3F1Q03052 451 aaPredicted RBP15.65■□□□□ 0.1
VCP-202ENST00000417448 ITGADQ13349 1161 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 GGTLC2Q14390 218 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 LAPTM4AQ15012 233 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 PPA1Q15181 289 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 STK11Q15831 433 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 B3GLCTQ6Y288 498 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 ZNF730Q6ZMV8 503 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 HIST3H2AQ7L7L0 130 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 DEPDC4Q8N2C3 294 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 MUC15Q8N387 334 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 MOSPD2Q8NHP6 518 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 HIST1H2ACQ93077 130 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 MCUR1Q96AQ8 359 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 ASB9Q96DX5 294 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 SOX7Q9BT81 388 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 SF3B5Q9BWJ5 86 aaKnown RBP15.65■□□□□ 0.1
VCP-202ENST00000417448 TRRAPQ9Y4A5 3859 aa15.65■□□□□ 0.1
VCP-202ENST00000417448 TRAF3IP2O43734 574 aaPredicted RBP15.64■□□□□ 0.09
VCP-202ENST00000417448 UPK3AO75631 287 aa15.64■□□□□ 0.09
VCP-202ENST00000417448 MT-ATP6P00846 226 aa15.64■□□□□ 0.09
VCP-202ENST00000417448 IGHV1-2P23083 117 aa15.64■□□□□ 0.09
VCP-202ENST00000417448 AQP2P41181 271 aa15.64■□□□□ 0.09
VCP-202ENST00000417448 PUDPQ08623 228 aa15.64■□□□□ 0.09
VCP-202ENST00000417448 CR1LQ2VPA4 569 aa15.64■□□□□ 0.09
VCP-202ENST00000417448 NHLRC1Q6VVB1 395 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms