RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 SLC51BQ86UW2 128 aa11.78□□□□□ -0.52
SCAF8-203ENST00000417268 ANGPTL6Q8NI99 470 aa11.78□□□□□ -0.52
SCAF8-203ENST00000417268 SCARB1Q8WTV0 552 aa11.78□□□□□ -0.52
SCAF8-203ENST00000417268 FOXRED1Q96CU9 486 aaPredicted RBP11.78□□□□□ -0.52
SCAF8-203ENST00000417268 PGAM5Q96HS1 289 aa11.78□□□□□ -0.52
SCAF8-203ENST00000417268 OR5B12Q96R08 314 aa11.78□□□□□ -0.52
SCAF8-203ENST00000417268 VRK1Q99986 396 aaPredicted RBP11.78□□□□□ -0.52
SCAF8-203ENST00000417268 SEC22CQ9BRL7 303 aa11.78□□□□□ -0.52
SCAF8-203ENST00000417268 IGHV3-20A0A0C4DH32 117 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 C4orf47A7E2U8 309 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 CD22P20273 847 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 BDKRB2P30411 391 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 ALDH3B1P43353 468 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 MESP2Q0VG99 397 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 TSPAN31Q12999 210 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 SRSF5Q13243 272 aaKnown RBP11.77□□□□□ -0.52
SCAF8-203ENST00000417268 NANOGP1Q8N7R0 232 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 LGALS14Q8TCE9 139 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 SCGB1C1Q8TD33 95 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 SSX3Q99909 188 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 INPP5EQ9NRR6 644 aa11.77□□□□□ -0.52
SCAF8-203ENST00000417268 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 PRSS44E7EML9 344 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 RAB40ALP0C0E4 278 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 POLR2HP52434 150 aaKnown RBP11.77□□□□□ -0.53
SCAF8-203ENST00000417268 RBPJQ06330 500 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 GAB1Q13480 694 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 GLB1L2Q8IW92 636 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 CRIPAKQ8N1N5 446 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 MORN4Q8NDC4 146 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 SLC2A12Q8TD20 617 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 RAB40AQ8WXH6 277 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 NUDT22Q9BRQ3 303 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 DNTTIP1Q9H147 329 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 IKZF5Q9H5V7 419 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 LSM5Q9Y4Y9 91 aaKnown RBP11.77□□□□□ -0.53
SCAF8-203ENST00000417268 RPS10-NUDT3A0A1W2PQS6 291 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 FTCDNL1E5RQL4 147 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 SLC33A1O00400 549 aaPredicted RBP11.77□□□□□ -0.53
SCAF8-203ENST00000417268 KNG1P01042 644 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 EIF1P41567 113 aaKnown RBP11.77□□□□□ -0.53
SCAF8-203ENST00000417268 RPS10P46783 165 aaKnown RBP11.77□□□□□ -0.53
SCAF8-203ENST00000417268 DUSP5Q16690 384 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 UBE2NLQ5JXB2 153 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 ANKRD53Q8N9V6 530 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 SEC22AQ96IW7 307 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 TMEM43Q9BTV4 400 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 CDCA4Q9BXL8 241 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 C20orf85Q9H1P6 137 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 SLC25A37Q9NYZ2 338 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 MRPS2Q9Y399 296 aaKnown RBP11.77□□□□□ -0.53
SCAF8-203ENST00000417268 KLRC4-KLRK1H3BQV0 150 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 DPP4P27487 766 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 MSX1P28360 303 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 TACR3P29371 465 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 GNRHRP30968 328 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 GALK2Q01415 458 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 GLO1Q04760 184 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 EXOSC2Q13868 293 aaKnown RBP11.77□□□□□ -0.53
SCAF8-203ENST00000417268 CD163Q86VB7 1156 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 MFSD4AQ8N468 514 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 OR5H2Q8NGV7 314 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 GHSRQ92847 366 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 NRSN2Q9GZP1 204 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 SPNS1Q9H2V7 528 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 MED20Q9H944 212 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 NIT2Q9NQR4 276 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 ZDBF2Q9HCK1 2354 aa11.77□□□□□ -0.53
SCAF8-203ENST00000417268 ZNF638Q14966 1978 aaKnown RBP11.76□□□□□ -0.53
SCAF8-203ENST00000417268 EEF1A1P68104 462 aaKnown RBP11.76□□□□□ -0.53
SCAF8-203ENST00000417268 TGFBR3Q03167 851 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 CLPPQ16740 277 aaPredicted RBP11.76□□□□□ -0.53
SCAF8-203ENST00000417268 PGAP1Q75T13 922 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 FAM122BQ7Z309 247 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 CPEB2Q7Z5Q1 589 aaKnown RBP11.76□□□□□ -0.53
SCAF8-203ENST00000417268 CCDC54Q8NEL0 328 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 OR6F1Q8NGZ6 308 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 CSF3RQ99062 836 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 NPFFR2Q9Y5X5 522 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 GGT3PA6NGU5 568 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 DDAH2O95865 285 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 GAAP10253 952 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 CLUP10909 449 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 ELAVL4P26378 380 aaKnown RBP11.76□□□□□ -0.53
SCAF8-203ENST00000417268 PPICP45877 212 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 SNRPGP62308 76 aaKnown RBP11.76□□□□□ -0.53
SCAF8-203ENST00000417268 RUNX2Q13950 521 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 SSX2Q16385 188 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 TMEM176BQ3YBM2 270 aaPredicted RBP11.76□□□□□ -0.53
SCAF8-203ENST00000417268 NXNL2Q5VZ03 156 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 LCN10Q6JVE6 187 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 FIP1L1Q6UN15 594 aaKnown RBP11.76□□□□□ -0.53
SCAF8-203ENST00000417268 ABHD4Q8TB40 342 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 TAAR9Q96RI9 348 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 CDCP1Q9H5V8 836 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 PRAMEF25A6NGN4 478 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 SLC34A2O95436 690 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 PTBP1P26599 531 aaKnown RBP eCLIP11.76□□□□□ -0.534e-10■■□□□ 13.8
SCAF8-203ENST00000417268 FASLGP48023 281 aa11.76□□□□□ -0.53
SCAF8-203ENST00000417268 CCL11P51671 97 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms