RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 FKBP6O75344 327 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 WNT11O96014 354 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 IGHMP01871 453 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 PGA4P0DJD7 388 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 PGA3P0DJD8 388 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 RAP1BP61224 184 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 RAP1AP62834 184 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 ARF1P84077 181 aaKnown RBP20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 MICAQ29983 383 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 ARMC4Q5T2S8 1044 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 OR52N5Q8NH56 324 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 OBP2BQ9NPH6 170 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 GRHPRQ9UBQ7 328 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 ZNF346Q9UL40 294 aaKnown RBP20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 MAGED1Q9Y5V3 778 aaPredicted RBP20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 U3KQV3 271 aa20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 DEFB108AA8MXU0 73 aa20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 ZNF99A8MXY4 864 aaPredicted RBP20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 TRMUO75648 421 aaKnown RBP20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 HRGP04196 525 aa20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 CD14P08571 375 aa20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 UBE2NP61088 152 aaKnown RBP20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 TSPAN31Q12999 210 aa20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 TOP3AQ13472 1001 aaPredicted RBP20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 PHYHD1Q5SRE7 291 aa20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 PGBD2Q6P3X8 592 aa20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 SMARCD3Q6STE5 483 aa20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 IGFN1Q86VF2 1251 aa20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 FNDC8Q8TC99 324 aa20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 MAGEE2Q8TD90 523 aaPredicted RBP20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 BCL2L2Q92843 193 aaPredicted RBP20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 PIK3IP1Q96FE7 263 aa20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 MRPL13Q9BYD1 178 aaKnown RBP20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 ESRP2Q9H6T0 727 aaKnown RBP20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 SLC25A15Q9Y619 301 aa20.26■□□□□ 0.83
SMARCB1-205ENST00000417137 ENTPD5O75356 428 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 ACVR1BP36896 505 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 GSSP48637 474 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 ERFP50548 548 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 ERVK-25P63136 954 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 KLHL17Q6TDP4 642 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 DPY19L2P2Q6ZN68 376 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 WDFY1Q8IWB7 410 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 CCDC36Q8IYA8 594 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 NOXO1Q8NFA2 376 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 RBP7Q96R05 134 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 GPA33Q99795 319 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 KATNB1Q9BVA0 655 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 MOV10Q9HCE1 1003 aaKnown RBP20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 DNAJB9Q9UBS3 223 aa20.25■□□□□ 0.83
SMARCB1-205ENST00000417137 E2F6O75461 281 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 QDPRP09417 244 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 ARHGDIAP52565 204 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 RUNX1T1Q06455 604 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 PPP1R8Q12972 351 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 HIST3H3Q16695 136 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 RFX4Q33E94 735 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 TBRG1Q3YBR2 411 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 HIKESHIQ53FT3 197 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 GPR139Q6DWJ6 353 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 YTHDF3Q7Z739 585 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 ARIH2OSQ8N7S6 290 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 WDR31Q8NA23 367 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 SYT14Q8NB59 555 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 OR9Q2Q8NGE9 314 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 FANK1Q8TC84 345 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 SLCO4A1Q96BD0 722 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 ZNF837Q96EG3 531 aaPredicted RBP20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 PLPPR2Q96GM1 343 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 GPX7Q96SL4 187 aaPredicted RBP20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 ALG12Q9BV10 488 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 VNN3Q9NY84 501 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 MGAT4BQ9UQ53 548 aa20.24■□□□□ 0.83
SMARCB1-205ENST00000417137 A0A096LPE4 126 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 A0A1W2PPZ6 126 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 XKRYO14609 159 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 DHHO43323 396 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 DEAF1O75398 565 aaPredicted RBP20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 GASTP01350 101 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 GSTM3P21266 225 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 SLC6A6P31641 620 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 ZNF84P51523 738 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 RPS6KA3P51812 740 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 ZNF770Q6IQ21 691 aaPredicted RBP20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 RPL13AP3Q6NVV1 102 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 LRFN4Q6PJG9 635 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 CDC20BQ86Y33 519 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 C10orf67Q8IYJ2 551 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 AQP11Q8NBQ7 271 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 GIPC3Q8TF64 312 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 MCHR2Q969V1 340 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 UTP4Q969X6 686 aaKnown RBP20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 RAB3IPQ96QF0 476 aaPredicted RBP20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 TSPAN32Q96QS1 320 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 FOXB1Q99853 325 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 NRIP3Q9NQ35 241 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 EDARQ9UNE0 448 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 AP4S1Q9Y587 144 aa20.23■□□□□ 0.83
SMARCB1-205ENST00000417137 ARPC4-TTLL3A0A0A6YYG9 625 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms