RNA–Protein interactions for RNA: ENST00000416093.1

RAF1-202, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-202ENST00000416093 MPGP29372 298 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 IFNGR2P38484 337 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 LIMS1P48059 325 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 ZBED5Q49AG3 693 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 C1orf146Q5VVC0 180 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 ZNF704Q6ZNC4 412 aaPredicted RBP13.12□□□□□ -0.31
RAF1-202ENST00000416093 C20orf204Q6ZNR8 217 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 Q71RC1 249 aaPredicted RBP13.12□□□□□ -0.31
RAF1-202ENST00000416093 ZER1Q7Z7L7 766 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 TMEM123Q8N131 208 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 OR6X1Q8NH79 312 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 PERPQ96FX8 193 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 RSRC1Q96IZ7 334 aaKnown RBP13.12□□□□□ -0.31
RAF1-202ENST00000416093 ADAD1Q96M93 576 aaKnown RBP13.12□□□□□ -0.31
RAF1-202ENST00000416093 USB1Q9BQ65 265 aaKnown RBP13.12□□□□□ -0.31
RAF1-202ENST00000416093 YY1AP1Q9H869 796 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 REEP1Q9H902 201 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 ARID1AO14497 2285 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 ROS1P08922 2347 aa13.12□□□□□ -0.31
RAF1-202ENST00000416093 ALPK2Q86TB3 2170 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 UNC119BA6NIH7 251 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 MCIDASD6RGH6 385 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 RAD51DO75771 328 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 CST1P01037 141 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 ITGA5P08648 1049 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 INHBBP09529 407 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 CTXN1P60606 82 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 PRPS1P60891 318 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 RPS4XP62701 263 aaKnown RBP13.11□□□□□ -0.31
RAF1-202ENST00000416093 TGFBR3Q03167 851 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 PPP1R8Q12972 351 aaKnown RBP13.11□□□□□ -0.31
RAF1-202ENST00000416093 FHL1Q13642 323 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 MELKQ14680 651 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 STK11Q15831 433 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 GABRA6Q16445 453 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 OR7E24Q6IFN5 339 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 HMBOX1Q6NT76 420 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 LINGO2Q7L985 606 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 BIVMQ86UB2 503 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 WDFY1Q8IWB7 410 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 C20orf196Q8IYI0 205 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 OR6N1Q8NGY5 312 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 HSD17B8Q92506 261 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 UTP4Q969X6 686 aaKnown RBP13.11□□□□□ -0.31
RAF1-202ENST00000416093 LRR1Q96L50 414 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 ALKBH3Q96Q83 286 aaPredicted RBP13.11□□□□□ -0.31
RAF1-202ENST00000416093 B3GAT2Q9NPZ5 323 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 VNN3Q9NY84 501 aa13.11□□□□□ -0.31
RAF1-202ENST00000416093 SAMHD1Q9Y3Z3 626 aaKnown RBP13.11□□□□□ -0.31
RAF1-202ENST00000416093 RPL36A-HNRNPH2H7BZ11 118 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 M0R3G1 203 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 GNGT2O14610 69 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 FKBP6O75344 327 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 PTP4A3O75365 173 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 CCNB2O95067 398 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 CDH2P19022 906 aaPredicted RBP13.1□□□□□ -0.31
RAF1-202ENST00000416093 CSNK1A1P48729 337 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 DAP3P51398 398 aaKnown RBP13.1□□□□□ -0.31
RAF1-202ENST00000416093 ROR2Q01974 943 aaKnown RBP13.1□□□□□ -0.31
RAF1-202ENST00000416093 TAF11Q15544 211 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 TAB1Q15750 504 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 KRTAP21-3Q3LHN1 58 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 PHYHD1Q5SRE7 291 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 YTHDF3Q7Z739 585 aaKnown RBP13.1□□□□□ -0.31
RAF1-202ENST00000416093 IGFN1Q86VF2 1251 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 P2RY8Q86VZ1 359 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 CIARTQ8N365 385 aaPredicted RBP13.1□□□□□ -0.31
RAF1-202ENST00000416093 LINC00471Q8N535 108 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 LRRC75AQ8NAA5 344 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 PAPD5Q8NDF8 572 aaKnown RBP13.1□□□□□ -0.31
RAF1-202ENST00000416093 OR4C15Q8NGM1 316 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 GNPDA2Q8TDQ7 276 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 IGFBPL1Q8WX77 278 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 ZNF566Q969W8 418 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 SLCO4A1Q96BD0 722 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 SLC25A44Q96H78 314 aaPredicted RBP13.1□□□□□ -0.31
RAF1-202ENST00000416093 Q96MF0 132 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 MUS81Q96NY9 551 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 GPA33Q99795 319 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 TMEM204Q9BSN7 226 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 NDEL1Q9GZM8 345 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 TXNIPQ9H3M7 391 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 GPR35Q9HC97 309 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 SIGLEC7Q9Y286 467 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 U3KQV3 271 aa13.1□□□□□ -0.31
RAF1-202ENST00000416093 NPIPB13A6NJU9 1138 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 OR5H1A6NKK0 313 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 NPIPB4C9JG80 1138 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 NDUFB2O95178 105 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 RPL4P36578 427 aaKnown RBP13.09□□□□□ -0.31
RAF1-202ENST00000416093 NR1H2P55055 460 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 TOP3AQ13472 1001 aaPredicted RBP13.09□□□□□ -0.31
RAF1-202ENST00000416093 CCNIQ14094 377 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 MICAQ29983 383 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 CEACAM16Q2WEN9 425 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 TIMM23BQ5SRD1 257 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 C1orf94Q6P1W5 598 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 PGBD2Q6P3X8 592 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 PRSS57Q6UWY2 283 aa13.09□□□□□ -0.31
RAF1-202ENST00000416093 HDDC2Q7Z4H3 204 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms