RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 LOC100289279A0A1B0GTE1 492 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 SHOX2O60902 331 aaPredicted RBP13.41□□□□□ -0.26
ACTB-202ENST00000414620 IGFBP1P08833 259 aaPredicted RBP13.41□□□□□ -0.26
ACTB-202ENST00000414620 ADRA2AP08913 450 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 RAB1AP62820 205 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 RAB39AQ14964 217 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 TRMT5Q32P41 509 aaKnown RBP13.41□□□□□ -0.26
ACTB-202ENST00000414620 INTS11Q5TA45 600 aaKnown RBP13.41□□□□□ -0.26
ACTB-202ENST00000414620 FAM166AQ6J272 317 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 NANOGNBQ7Z5D8 188 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 SNX32Q86XE0 403 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 PHC2Q8IXK0 858 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 IL17RDQ8NFM7 739 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 SPATA3Q8NHX4 192 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 FGFBP3Q8TAT2 258 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 TSPEARQ8WU66 669 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 NEU4Q8WWR8 484 aaPredicted RBP13.41□□□□□ -0.26
ACTB-202ENST00000414620 TMEM54Q969K7 222 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 SYT3Q9BQG1 590 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 SOX7Q9BT81 388 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 MRPL37Q9BZE1 423 aaKnown RBP13.41□□□□□ -0.26
ACTB-202ENST00000414620 VIPAS39Q9H9C1 493 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 TAS2R5Q9NYW4 299 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 GLTPQ9NZD2 209 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 CMAHPQ9Y471 501 aa13.41□□□□□ -0.26
ACTB-202ENST00000414620 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.4□□□□□ -0.263e-15■■□□□ 12.7
ACTB-202ENST00000414620 LYNX1G3V0Z9 82 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 PHF1O43189 567 aaPredicted RBP13.4□□□□□ -0.26
ACTB-202ENST00000414620 SASH3O75995 380 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 UBL3O95164 117 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 ERCC1P07992 297 aaPredicted RBP13.4□□□□□ -0.26
ACTB-202ENST00000414620 LYNX1P0DP58 116 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 H2AFXP16104 143 aaPredicted RBP13.4□□□□□ -0.26
ACTB-202ENST00000414620 NR4A1P22736 598 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 GALK2Q01415 458 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 MMEL1Q495T6 779 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 GKAP1Q5VSY0 366 aaPredicted RBP13.4□□□□□ -0.26
ACTB-202ENST00000414620 REP15Q6BDI9 236 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 NANOGP8Q6NSW7 305 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 DEF8Q6ZN54 512 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 ZNF627Q7L945 461 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 CARM1Q86X55 608 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 SKA3Q8IX90 412 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 OR6X1Q8NH79 312 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 PFN4Q8NHR9 129 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 ZNF566Q969W8 418 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 MRPL24Q96A35 216 aaKnown RBP13.4□□□□□ -0.26
ACTB-202ENST00000414620 PRSS27Q9BQR3 290 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 SIKE1Q9BRV8 207 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 NANOGQ9H9S0 305 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 TMEM160Q9NX00 188 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 LPAR3Q9UBY5 353 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 SH3GLB1Q9Y371 365 aa13.4□□□□□ -0.26
ACTB-202ENST00000414620 BLOC1S5-TXNDC5H3BN57 136 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 FXYD1O00168 92 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 MRASO14807 208 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 HIST1H2ABP04908 130 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 ASAH2BP0C7U1 165 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 ZNF35P13682 527 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 ZNF23P17027 643 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 TCN1P20061 433 aaPredicted RBP13.39□□□□□ -0.27
ACTB-202ENST00000414620 IL2RGP31785 369 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 ALDH3B1P43353 468 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 UGT2B15P54855 530 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 TAS2R41P59536 307 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 MYBPC1Q00872 1141 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 SRSF2Q01130 221 aaKnown RBP13.39□□□□□ -0.27
ACTB-202ENST00000414620 ZP4Q12836 540 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 CYLC2Q14093 348 aaPredicted RBP13.39□□□□□ -0.27
ACTB-202ENST00000414620 MAD2L1BPQ15013 274 aaPredicted RBP13.39□□□□□ -0.27
ACTB-202ENST00000414620 TRIP10Q15642 601 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 CCDC80Q76M96 950 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 HIST3H2AQ7L7L0 130 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 LRP11Q86VZ4 500 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 NKAIN4Q8IVV8 208 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 SLC22A24Q8N4F4 322 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 UBASH3BQ8TF42 649 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 HIST1H2ACQ93077 130 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 LRRC58Q96CX6 371 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 MPP4Q96JB8 637 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 SH3GL3Q99963 347 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 ECSITQ9BQ95 431 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 ZNF426Q9BUY5 554 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 PCDHAC1Q9H158 963 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 OR51B6Q9H340 312 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 MEPEQ9NQ76 525 aaPredicted RBP13.39□□□□□ -0.27
ACTB-202ENST00000414620 MYEF2Q9P2K5 600 aaKnown RBP13.39□□□□□ -0.27
ACTB-202ENST00000414620 ZNF229Q9UJW7 825 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 SPEF1Q9Y4P9 236 aa13.39□□□□□ -0.27
ACTB-202ENST00000414620 FBN1P35555 2871 aaKnown RBP13.39□□□□□ -0.27
ACTB-202ENST00000414620 M0R233 179 aa13.38□□□□□ -0.27
ACTB-202ENST00000414620 TGFAP01135 160 aa13.38□□□□□ -0.27
ACTB-202ENST00000414620 F13BP05160 661 aa13.38□□□□□ -0.27
ACTB-202ENST00000414620 PGA4P0DJD7 388 aa13.38□□□□□ -0.27
ACTB-202ENST00000414620 PGA3P0DJD8 388 aa13.38□□□□□ -0.27
ACTB-202ENST00000414620 SRD5A1P18405 259 aa13.38□□□□□ -0.27
ACTB-202ENST00000414620 GLRXP35754 106 aa13.38□□□□□ -0.27
ACTB-202ENST00000414620 OR1E2P47887 323 aa13.38□□□□□ -0.27
ACTB-202ENST00000414620 ARFIP2P53365 341 aa13.38□□□□□ -0.27
ACTB-202ENST00000414620 SEC24CP53992 1094 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms