RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 ACOT4Q8N9L9 421 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 SPANXA2-OT1Q8N9U9 137 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 OR52B4Q8NGK2 314 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 OR13G1Q8NGZ3 307 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 COQ8AQ8NI60 647 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 FAM110BQ8TC76 370 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 KLF14Q8TD94 323 aaPredicted RBP0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 MYLPFQ96A32 169 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 TMEM186Q96B77 213 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 SGK3Q96BR1 496 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 DNAJC1Q96KC8 554 aaKnown RBP0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 NSMCE2Q96MF7 247 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 VPS35Q96QK1 796 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 NIPSNAP3BQ9BS92 247 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 EDEM2Q9BV94 578 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 LINC00597Q9H2U6 94 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 RBKSQ9H477 322 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 POLD4Q9HCU8 107 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 NUDT15Q9NV35 164 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 MTRRQ9UBK8 725 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 TBK1Q9UHD2 729 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 PACSIN2Q9UNF0 486 aaPredicted RBP0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 KIAA1671Q9BY89 1806 aa0.17□□□□□ -2.38
RNU2-55P-201ENST00000411146 MALRD1Q5VYJ5 2156 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 UBE4BO95155 1302 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 FAM230AA0A1W2PPH8 454 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 TMEM120BA0PK00 339 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 SYCE3A1L190 88 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 ARHGAP42A6NI28 874 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 SLC9B1P1A6NJY1 282 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 HIDE1A8MVS5 230 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 BTNL10A8MVZ5 291 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 H0YJW9 148 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 CTAGE5O15320 804 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 BCAS1O75363 584 aaPredicted RBP0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 YIF1AO95070 293 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 SLC25A14O95258 325 aaPredicted RBP0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 PTBP3O95758 552 aaKnown RBP0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 IGLV2-8P01709 118 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 IGHG4P01861 327 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 GAPDHP04406 335 aaKnown RBP0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 HSP90AB1P08238 724 aaKnown RBP0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 PRB4P10163 310 aaPredicted RBP0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 IFI30P13284 250 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 MMP11P24347 488 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 YWHABP31946 246 aaKnown RBP0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 NPBWR2P48146 333 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 CASP4P49662 377 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 GZMMP51124 257 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 FUT5Q11128 374 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 OXA1LQ15070 435 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 PON2Q15165 354 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 CEBPEQ15744 281 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 NIPAL3Q6P499 406 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 KCNIP4Q6PIL6 250 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 CENPUQ71F23 418 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 ACOT1Q86TX2 421 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 CLEC4FQ8N1N0 589 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 NKAIN3Q8N8D7 197 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 IPMKQ8NFU5 416 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 OR52H1Q8NGJ2 320 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 OR5D13Q8NGL4 314 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 SLC25A46Q96AG3 418 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 WDR34Q96EX3 536 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 MED8Q96G25 268 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 RNF2Q99496 336 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 OR52D1Q9H346 318 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 SLC38A10Q9HBR0 1119 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 ATXN10Q9UBB4 475 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 SPASTQ9UBP0 616 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 ZNF639Q9UID6 485 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 RPL36Q9Y3U8 105 aaKnown RBP0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 KDRP35968 1356 aa0.16□□□□□ -2.38
RNU2-55P-201ENST00000411146 TCRBV9S1A1TA0A576 114 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 LRP5LA4QPB2 252 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 ZNF726A6NNF4 738 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 BPY2O14599 106 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 HSD17B6O14756 317 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 RASGRF2O14827 1237 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 RGS16O15492 202 aaPredicted RBP0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 ZSCAN12O43309 604 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 BCAS2O75934 225 aaPredicted RBP0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 UTS2O95399 124 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 OXSR1O95747 527 aaPredicted RBP0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 TGFAP01135 160 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 ZNF35P13682 527 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 CMA1P23946 247 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 DCKP27707 260 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 LOXP28300 417 aaPredicted RBP0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 SYKP43405 635 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 CDKN1BP46527 198 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 CCR8P51685 355 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 AP3M2P53677 418 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 NUCB2P80303 420 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 IFT88Q13099 833 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 MAB21L1Q13394 359 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 DUSP7Q16829 419 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 PLET1Q6UQ28 207 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 RABEPKQ7Z6M1 372 aa0.15□□□□□ -2.39
RNU2-55P-201ENST00000411146 ZSCAN30Q86W11 494 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms